Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B17
(928 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 60 8e-08
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 55 3e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 54 5e-06
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 50 8e-05
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 49 2e-04
UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1; ... 42 0.022
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 41 0.052
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 40 0.090
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.28
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 37 0.64
UniRef50_A7S635 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.5
UniRef50_Q7NJU9 Cluster: Gll1733 protein; n=1; Gloeobacter viola... 34 4.5
UniRef50_Q135B8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_Q5XGY6 Cluster: LOC495114 protein; n=3; Euteleostomi|Re... 33 7.8
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 60.1 bits (139), Expect = 8e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1
Query: 832 PPXQPDRCALSGNYRLESNPXKNXLSPLAXAT 927
PP QPDRCALSGNYRLESNP ++ LSPLA AT
Sbjct: 4 PPVQPDRCALSGNYRLESNPVRHDLSPLAAAT 35
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 54.8 bits (126), Expect = 3e-06
Identities = 38/86 (44%), Positives = 44/86 (51%)
Frame = +2
Query: 644 RFPPGKLPXCAPPVXXPCRFTRIPXPPFLPFGKAWXLPHXSRX*VSXXRCKVVRXQXGLC 823
RFP + P CA + PCR PPF +AW +S RC+ +C
Sbjct: 47 RFPL-EAPSCAL-LFRPCRLPDT-CPPF-SLREAWRFLIAHAVGISV-RCRSFAPSWAVC 101
Query: 824 ARTPRFSPTAAPYPVTIVLSPTRXKT 901
P FSPTAAPYPVTIVLSPTR T
Sbjct: 102 TNPP-FSPTAAPYPVTIVLSPTRKDT 126
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 54.0 bits (124), Expect = 5e-06
Identities = 31/66 (46%), Positives = 38/66 (57%)
Frame = +2
Query: 704 TRIPXPPFLPFGKAWXLPHXSRX*VSXXRCKVVRXQXGLCARTPRFSPTAAPYPVTIVLS 883
+RIP PPF G L H S +S RC+ + ++ P FSPTAAPYPVT+ LS
Sbjct: 54 SRIPVPPFSLAGSV-ALSHSSHSGISA-RCRSFAPSWAV-SKNPPFSPTAAPYPVTVHLS 110
Query: 884 PTRXKT 901
PTR T
Sbjct: 111 PTRKST 116
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 50.0 bits (114), Expect = 8e-05
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -1
Query: 913 VAIXRFXPGWTQDDSYRIRRSGRAEXGGSCTQP 815
+A+ R PGWTQDDSYRIRRSGRAE G P
Sbjct: 1 MALRRALPGWTQDDSYRIRRSGRAERGVRAHSP 33
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 48.8 bits (111), Expect = 2e-04
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = -1
Query: 913 VAIXRFXPGWTQDDSYRIRRSGRAEXGGSCTQPXLXANDLTPXXRYLXA*XMRKXPRFPE 734
+A R PGWTQDDSYR RS RAE G P ++ R + K PRFP+
Sbjct: 1 MAFLRVRPGWTQDDSYRKGRSSRAERGVRAYSPAW--SERPKPSRDTSSVSYEKAPRFPK 58
Query: 733 GEK 725
G+K
Sbjct: 59 GKK 61
>UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1;
Edwardsiella tarda|Rep: Putative uncharacterized protein
- Edwardsiella tarda
Length = 99
Score = 41.9 bits (94), Expect = 0.022
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +2
Query: 809 QXGLCARTPRFSPTAAPYPVTIVLSPTRXKTXYRHW 916
Q G C +P FSPT P VT++L+PT T RHW
Sbjct: 64 QAGFCTNSP-FSPTITPVQVTVLLNPTLTDTQKRHW 98
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 40.7 bits (91), Expect = 0.052
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -1
Query: 913 VAIXRFXPGWTQDDSYRIRRSGRAEXG 833
+A R PGWTQ +SYRIRRS RAE G
Sbjct: 1 MAFYRAFPGWTQVNSYRIRRSSRAERG 27
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 39.9 bits (89), Expect = 0.090
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 92 DMIRYIDEFGQTTTRMQ 142
DMIRYIDEFGQTTTRMQ
Sbjct: 348 DMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 38.3 bits (85), Expect = 0.28
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 290 ALMNRPXRGERRVAYWAL 343
ALMNRP RGERR AYWAL
Sbjct: 26 ALMNRPTRGERRFAYWAL 43
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.1 bits (82), Expect = 0.64
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -3
Query: 341 APNTQPASPRALADSLMQ 288
APNTQ ASPRALADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_A7S635 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1257
Score = 35.9 bits (79), Expect = 1.5
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = -2
Query: 243 NAIVCLLTCLLQLYNGYK*SNSITKFHK*SIFFNCILVVVCPNSSMYLIMSDPITLXKGN 64
NA+ L+ QLYNG+ SN+I IFFN I P L P TL K N
Sbjct: 1068 NAMFVLVLFWYQLYNGFSGSNAIDDLS--LIFFNLIFTAAPPIVCGILDKDLPATLLKDN 1125
Query: 63 PR 58
P+
Sbjct: 1126 PQ 1127
>UniRef50_Q7NJU9 Cluster: Gll1733 protein; n=1; Gloeobacter
violaceus|Rep: Gll1733 protein - Gloeobacter violaceus
Length = 503
Score = 34.3 bits (75), Expect = 4.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 556 APXEQASQKFDASSSXVGETRTGXIKXTRPFPPWKAPSLRPXCXRXLPLYPXTXSAXSPL 735
AP +Q+S F +++ G I+ PF P + PS+ P P P +A S
Sbjct: 22 APEDQSSAPFKPTTTPARPAPAGAIQLQPPFKPMQTPSVSPSKPAATPSPPVPTAAKSGT 81
Query: 736 RES 744
R++
Sbjct: 82 RQT 84
>UniRef50_Q135B8 Cluster: Putative uncharacterized protein; n=1;
Rhodopseudomonas palustris BisB5|Rep: Putative
uncharacterized protein - Rhodopseudomonas palustris
(strain BisB5)
Length = 140
Score = 34.3 bits (75), Expect = 4.5
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 338 ALXPLPRLTDSLRSGRSGCGERVSASLQGRNTVIHRNQGI 457
A+ P P + + RS SGC E + S+Q +TV+ + QG+
Sbjct: 10 AVTPTPAIVVNFRSYASGCAEPTTCSVQVADTVLRQGQGM 49
>UniRef50_Q5XGY6 Cluster: LOC495114 protein; n=3; Euteleostomi|Rep:
LOC495114 protein - Xenopus laevis (African clawed frog)
Length = 1326
Score = 33.5 bits (73), Expect = 7.8
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 584 STPQV-QXLAKPEQXLLXIPGRFPPGKLPXCAPPVXXPCRFT---RIPXPPFLP 733
S PQV L P L P PP LP C PP+ P F+ +P PP P
Sbjct: 724 SPPQVLNSLPPPSLTGLPFPPPPPPPPLPGCPPPICPPPPFSNSLNLPPPPPAP 777
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,976,892
Number of Sequences: 1657284
Number of extensions: 11871086
Number of successful extensions: 25110
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25052
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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