Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B09
(857 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14698| Best HMM Match : E1_DerP2_DerF2 (HMM E-Value=4.1e-31) 42 6e-04
SB_54376| Best HMM Match : DUF1300 (HMM E-Value=8.2) 30 2.1
SB_50969| Best HMM Match : Cation_efflux (HMM E-Value=4.1) 30 2.8
SB_43766| Best HMM Match : RVT_1 (HMM E-Value=0.43) 29 6.4
SB_46214| Best HMM Match : A_amylase_inhib (HMM E-Value=2.1) 28 8.5
SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_43534| Best HMM Match : A_amylase_inhib (HMM E-Value=2.1) 28 8.5
>SB_14698| Best HMM Match : E1_DerP2_DerF2 (HMM E-Value=4.1e-31)
Length = 167
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 198 EVRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAEIPFDALYNADAC 377
E+ ++PC C KG N F P + +FG+ G ++PF L N + C
Sbjct: 37 ELDLEPC-EEEPCTFHKGSNETCKATFVPNELVSSATIEVFGIIGGVQVPF-PLKNPNVC 94
Query: 378 TL--TSCPTEAGKTQTLD 425
CP AG + TLD
Sbjct: 95 ENHGVKCPINAGDSATLD 112
>SB_54376| Best HMM Match : DUF1300 (HMM E-Value=8.2)
Length = 295
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 471 IQMEALE*RQ*EPDVLLQNKCEACLVKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
IQ+ AL Q D ++Q L +L TDCI+ V L L TDC++ + +
Sbjct: 36 IQVVALNTLQLATDCIIQVVVLNTL-QLATDCIIQVVVLITLQLATDCIIQVVVL 89
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 12 LQLATDCIIQVVVLVTLQLATDCIIQVVAL 41
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 236 LQLATDCIIQVVVLVTLQLATDCIIQVVAL 265
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 124 LQLATDCIIQVVVLVTLQLATDCIIQVVVL 153
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 156 LQLATDCIIQVVVLVTLQLATDCIIQVVVL 185
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 172 LQLATDCIIQVVVLVTLQLATDCIIQVVVL 201
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 28 LQLATDCIIQVVALNTLQLATDCIIQVVVL 57
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 108 LQLATDCIIQVVVLITLQLATDCIIQVVVL 137
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 140 LQLATDCIIQVVVLITLQLATDCIIQVVVL 169
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 188 LQLATDCIIQVVVLITLQLATDCIIQVVVL 217
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 76 LQLATDCIIQVVVLNTLQLATDCIIQVVVL 105
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 92 LQLATDCIIQVVVLNTLQLATDCIIQVVVL 121
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 204 LQLATDCIIQVVVLITLQLATDCIMQVVVL 233
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 220 LQLATDCIMQVVVLITLQLATDCIIQVVVL 249
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 252 LQLATDCIIQVVALNTLQLATDCILQVVVL 281
>SB_50969| Best HMM Match : Cation_efflux (HMM E-Value=4.1)
Length = 295
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 471 IQMEALE*RQ*EPDVLLQNKCEACLVKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
IQ+ L Q D ++Q L +L TDCI+ V L L TDC++ + +
Sbjct: 228 IQVVVLNTLQLATDCIIQVVVLVTL-QLATDCIIQVVVLVTLQLATDCIIQVVVL 281
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 12 LQLATDCIIQVVVLVTLQLATDCIIQVVVL 41
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 44 LQLATDCIIQVVVLVTLQLATDCIIQVVVL 73
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 92 LQLATDCIIQVVVLVTLQLATDCIIQVVVL 121
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 108 LQLATDCIIQVVVLVTLQLATDCIIQVVVL 137
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 28 LQLATDCIIQVVVLITLQLATDCIIQVVVL 57
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 60 LQLATDCIIQVVVLITLQLATDCIIQVVVL 89
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 76 LQLATDCIIQVVVLITLQLATDCIIQVVVL 105
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 124 LQLATDCIIQVVVLITLQLATDCIIQVVVL 153
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 140 LQLATDCIIQVVVLITLQLATDCIIQVVVL 169
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 156 LQLATDCIIQVVVLITLQLATDCIIQVVVL 185
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 188 LQLATDCIIQVVVLITLQLATDCIIQVVVL 217
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 204 LQLATDCIIQVVVLITLQLATDCIIQVVVL 233
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 172 LQLATDCIIQVVVLNTLQLATDCIIQVVVL 201
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 546 VKLLTDCIVNVKKLALSTLLTDCVVNTLCM 635
++L TDCI+ V L L TDC++ + +
Sbjct: 220 LQLATDCIIQVVVLNTLQLATDCIIQVVVL 249
>SB_43766| Best HMM Match : RVT_1 (HMM E-Value=0.43)
Length = 491
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 138 FNVVTTRLCREVDASACT--VNEVRIDPCVNSRLCHLKKGKNA 260
F T+LC + S CT + I+P V SRL L KG+ A
Sbjct: 32 FKQSATKLCDAMTKSLCTKYFDPETIEPLVASRLIPLDKGEGA 74
>SB_46214| Best HMM Match : A_amylase_inhib (HMM E-Value=2.1)
Length = 344
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 106 RCISRLWSKLNSTSSPQGYVGKWTPAR 186
R + RLW K S ++ Q GKW R
Sbjct: 130 RQLQRLWDKNRSAAAEQALTGKWQEVR 156
>SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 568 IQSVSSFTKQASHLFCSSTSGSH 500
+Q+VS+ K SHLF SS G+H
Sbjct: 559 VQAVSTANKYISHLFSSSLFGTH 581
>SB_43534| Best HMM Match : A_amylase_inhib (HMM E-Value=2.1)
Length = 334
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 106 RCISRLWSKLNSTSSPQGYVGKWTPAR 186
R + RLW K S ++ Q GKW R
Sbjct: 167 RQLQRLWDKNRSAAAEQALTGKWQEVR 193
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,986,208
Number of Sequences: 59808
Number of extensions: 403004
Number of successful extensions: 1084
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2443309836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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