Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_B06
(934 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 6e-48
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 163 2e-40
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 81 1e-15
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 57 2e-08
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.76
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_43312| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0) 29 5.4
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 5.4
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17) 29 7.1
SB_9821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_28047| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08) 28 9.4
SB_13990| Best HMM Match : Ribosomal_L19 (HMM E-Value=4.1e-15) 28 9.4
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 188 bits (458), Expect = 6e-48
Identities = 93/199 (46%), Positives = 123/199 (61%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
+PV GLGTWKSKPG+V AVK AI GYRHIDCAY Y NEKEVG+A+ ++ VV R+D
Sbjct: 12 MPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALR-ELLGSVVERKD 70
Query: 335 LFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQ 514
LFITSKLWNT H P VR ++L +L + YLDLYLIHWP ++++ FP D+ G +
Sbjct: 71 LFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRDGDEFFPKDEQGNVL 130
Query: 515 FXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLNQ 694
+ + + +A NSKQ++ + A +KPV NQVECHP LNQ
Sbjct: 131 YAYHDPCDTWKAMEKLVDEGL-VKAIGLSNFNSKQVDDICAIARIKPVANQVECHPLLNQ 189
Query: 695 KRLKEFCEARGVKITAYSP 751
+L + + ++ AYSP
Sbjct: 190 AKLIDHHKKHNIQTIAYSP 208
Score = 59.7 bits (138), Expect = 3e-09
Identities = 44/113 (38%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +1
Query: 532 TWTPGKAMEPLVKEGLVKSIGVSNFKLEAAGEVAA-ARDCQAGRQSGGMSSLPQPETPQG 708
TW KAME LV EGLVK+IG+SNF + ++ A AR Q L Q +
Sbjct: 139 TW---KAMEKLVDEGLVKAIGLSNFNSKQVDDICAIARIKPVANQVECHPLLNQAKLID- 194
Query: 709 VL*GSRREDHGV----LSPSARRTDPGAKPDDPQLMEDPKLKAIADRLGKTVA 855
+ H + SP P AKPDDP +M DP + A+ADR +TVA
Sbjct: 195 -----HHKKHNIQTIAYSPLGSLDRPWAKPDDPHVMRDPTMVAMADRYSRTVA 242
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 163 bits (395), Expect = 2e-40
Identities = 85/184 (46%), Positives = 112/184 (60%)
Frame = +2
Query: 176 TWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKL 355
TW+S EV AV+ AI++GYRHIDCA +YGNE E+GEA++ + EG V RE+LF+TSKL
Sbjct: 59 TWQSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKL 118
Query: 356 WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFXXXXXX 535
W H PD V A Q TL NL + YLDLYLIH P A+K+ L + G I +
Sbjct: 119 WCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQ 178
Query: 536 XXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFC 715
K + S S K+L +LL+ A++ P NQVE HPYL Q++LKEFC
Sbjct: 179 NTWQAMEGLVAKGLCKAIGVSNFS-VKRLNKLLETASIVPACNQVELHPYLPQEKLKEFC 237
Query: 716 EARG 727
+++G
Sbjct: 238 DSKG 241
Score = 52.0 bits (119), Expect = 7e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 170 LGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
L TW S G+V AV+ A ++GYR IDCA ++GNE GEA++ + +G V RE+
Sbjct: 4 LCTWHSYKGKVGNAVRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREE 55
Score = 29.9 bits (64), Expect = 3.1
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +2
Query: 698 RLKEFCEARGVKITAYSP 751
+ K+FC+++G+ +TAYSP
Sbjct: 280 KCKDFCDSKGILLTAYSP 297
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 81.0 bits (191), Expect = 1e-15
Identities = 63/199 (31%), Positives = 91/199 (45%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
IP+ GLG QAV A++ GYR ID A Y NE+ VGEA+ + R +
Sbjct: 76 IPLLGLGAHDIHS---KQAVLWALESGYRLIDTASRYHNEQSVGEAVRCSN----IPRCE 128
Query: 335 LFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQ 514
+++ +K++ T H A ++L L + Y+DLYLIH+P P+ G Q
Sbjct: 129 IYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFP---------VPSGVVGSWQ 179
Query: 515 FXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHPYLNQ 694
R R+ N + LE L Q V P VNQ+E HP+L
Sbjct: 180 ------------AMIDLRSRGLIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVHPFLQM 227
Query: 695 KRLKEFCEARGVKITAYSP 751
K L ++C+ + I A+SP
Sbjct: 228 KELTQYCKRHNITIQAFSP 246
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 547 KAMEPLVKEGLVKSIGVSNFKLE 615
+AM L GL++SIGVSNF ++
Sbjct: 179 QAMIDLRSRGLIRSIGVSNFNIQ 201
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 57.2 bits (132), Expect = 2e-08
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 IPVFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 334
IP FGLG + QAV A++ GYR ID A Y NEK VGEA ++E V R +
Sbjct: 9 IPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEA----LRESAVPRSE 64
Query: 335 LFITSKLWNTFHRPDLVRGALQETLDNL 418
+++ +K+++T H + A +L L
Sbjct: 65 VYLVTKVYHTDHGYEKTMKAYDRSLSAL 92
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 221 AIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQ 400
A+ GYR +D A +Y NEKEVG A+ K G + RED+++T+KL + +
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVR---KSG-LKREDIYVTTKLKPSEEGHSNALKYAK 108
Query: 401 ETLDNLNVQYLDLYLIHWPQ 460
E++ L++ Y+DL+LIH P+
Sbjct: 109 ESIKKLDIGYVDLFLIHTPR 128
Score = 37.9 bits (84), Expect = 0.012
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 620 LERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSP 751
LE L + P +NQ+E +P+ Q+ + ++C G+ + Y+P
Sbjct: 161 LEELRKAGCRTPAINQIEINPFWRQEEIIKYCNKHGITVEGYAP 204
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 550 AMEPLVKEGLVKSIGVSNFKLEAAGEVAAA 639
A+ L +EGL++S+GVSNF + E+ A
Sbjct: 138 ALLTLKEEGLIRSVGVSNFGVHHLEELRKA 167
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 54.0 bits (124), Expect = 2e-07
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 2/202 (0%)
Frame = +2
Query: 149 HLIPVFGLGTWKSKPGEVT-QAVKDAIDIGYRHIDCAYVYG-NEKEVGEAITSKIKEGVV 322
+ +PV G GT + GE T VK A++ GYR ID A Y +E +V +AI + +
Sbjct: 335 YTMPVMGFGT--ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVAKAIA----DSGI 388
Query: 323 TREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQS 502
R+D+FI +KL + + +++ +L L+ Y+DL+LIH K T
Sbjct: 389 PRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIH----SKTCDDFLLTCAE 444
Query: 503 GKIQFXXXXXXXXXXXXXXXXXKRVWSRASESPTSNSKQLERLLQHATVKPVVNQVECHP 682
G+ ++ R+ N +L+ L+ ATV Q P
Sbjct: 445 GE----PRGTWKESWKAMEELHRQGKIRSLGVSNFNVDELQELVNFATVPVSAVQNWFDP 500
Query: 683 YLNQKRLKEFCEARGVKITAYS 748
+ ++ + FC G++ YS
Sbjct: 501 FHQDRKARRFCNKHGIRYIGYS 522
Score = 33.1 bits (72), Expect = 0.33
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 532 TWTPG-KAMEPLVKEGLVKSIGVSNFKLEAAGEV 630
TW KAME L ++G ++S+GVSNF ++ E+
Sbjct: 450 TWKESWKAMEELHRQGKIRSLGVSNFNVDELQEL 483
>SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 31.9 bits (69), Expect = 0.76
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +2
Query: 200 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 379
V + + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 260 VPEKITNIIRKSYEEMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 319
Query: 380 LVRGALQETLDNL--NVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 511
R +Q TL ++ + DL L+ Q ++ + D S K+
Sbjct: 320 QKRNGIQWTLWKQLDDLDFADLALLFHTQQQMQEKTNIVADNSAKL 365
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -3
Query: 485 RESRLPCRPGASVSGTD--PSTERSDCPGSPAGHRAPSPGDETCSTVS 348
R+ P R G+ T+ PS RSD S G S GDE ST+S
Sbjct: 151 RKHSTPARTGSQRESTERVPSVSRSDTSSSLTGSSPASLGDELESTLS 198
>SB_43312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 544 GKAMEPLVKEGLVKSIGVSNFKLEAAGEVAAARDCQAGRQSGGMSSLP 687
G+++E V+E LVK +G K+ E AR C S G+++LP
Sbjct: 24 GQSVEAGVQESLVKYVGRPLVKVMEYLENEHARHCVPSNISSGLATLP 71
>SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 761
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 182 KSKP-GEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 310
KS P G + V A + YRH +Y++G++ EV T +K
Sbjct: 6 KSHPIGTIAVGVAIAAAVYYRHSIKSYIFGDDNEVSALATCVVK 49
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 826 WPSVWGPP*AGGRRAWPQGLSGEPRGRVRRD 734
WP V GPP G W +G G P G RD
Sbjct: 1839 WPGVPGPPGPPGAYGW-KGYPGNPAGPPGRD 1868
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 452 SVSGTDPSTERSDCPGSPAGHRAPSP 375
S S T PS RSD P +P G AP P
Sbjct: 594 SSSHTAPSRGRSDSPPTPEGRGAPPP 619
>SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17)
Length = 321
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 173 GTWKSKPGEVTQAVKDAIDIGYRHIDCA 256
G+W + P +VT ++ +D+G RH+ CA
Sbjct: 209 GSWCASPSDVTPFLQ--VDLGTRHVICA 234
>SB_9821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 IDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLW----NTFHRPDLVRG 391
I++ Y+H +C+ + + S +++G + LF+ + W T +P ++
Sbjct: 104 IELFYQHFECSVILDGHLSEWFPVNSGVRQGCIISPLLFLLAIDWIMRNTTADKPRGIQW 163
Query: 392 ALQETLDNLNVQY 430
L L++L+ Y
Sbjct: 164 TLTSQLEDLDFAY 176
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 500 IGRSGRESRLPCRPGASVSGTDPSTERSDCPGSPAGHRAPS--PGDETCSTVS 348
+G S + + G SVSG P+++ PG P+ PS P E S+ +
Sbjct: 1330 LGFSASGNSWSTQDGMSVSGLTPNSQPWAAPGGPSSSSTPSSDPSAEAASSTA 1382
>SB_28047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 962
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 513 SSRXVDYVDTWXGYGAARQRGSGQEHRSLQ--LQTRSSWRGCCSTRLSSRSS 662
SSR DY D Y A+ R LQ L SSW G C+ L+ + +
Sbjct: 756 SSRLADYADDTTFYAHAKPCDISDCERCLQLALDRLSSWSGECNLTLNPKKT 807
>SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 28.3 bits (60), Expect = 9.4
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +2
Query: 200 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 379
V++ + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 726 VSEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 785
Query: 380 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 511
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 786 QKRNGIQWTLWKQLDDLDFAD-DLALLSHTQQQMQEKTNIVADNSARL 832
>SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08)
Length = 421
Score = 28.3 bits (60), Expect = 9.4
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +2
Query: 200 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 379
V++ + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 82 VSEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 141
Query: 380 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 511
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 142 QKRNGIQWTLWKQLDDLDFAD-DLALLSHTQQQMQEKTNIVADNSARL 188
>SB_13990| Best HMM Match : Ribosomal_L19 (HMM E-Value=4.1e-15)
Length = 267
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 647 VKPVVNQVECHPYLNQKRLKEFCEARGVKIT 739
+K + Q +CH L Q ++ EFC V +T
Sbjct: 115 IKTFLEQRDCHDRLQQLKVPEFCVGSTVAVT 145
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,344,174
Number of Sequences: 59808
Number of extensions: 615881
Number of successful extensions: 1837
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1827
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2717121828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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