Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_N20
(866 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g25610.1 68416.m03188 haloacid dehalogenase-like hydrolase fa... 34 0.14
At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase fa... 33 0.33
At1g68710.1 68414.m07850 haloacid dehalogenase-like hydrolase fa... 31 0.75
At3g03970.3 68416.m00418 expressed protein 31 1.00
At3g03970.2 68416.m00417 expressed protein 31 1.00
At3g03970.1 68416.m00416 expressed protein 31 1.00
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 4.0
At3g27870.1 68416.m03475 haloacid dehalogenase-like hydrolase fa... 29 4.0
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 4.0
>At3g25610.1 68416.m03188 haloacid dehalogenase-like hydrolase family
protein similar to Potential phospholipid-transporting
ATPase (EC 3.6.3.1) from Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like hydrolase
Length = 1202
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -3
Query: 318 NVFIFSXDTISSRVYDEDLTVRFCFKF 238
NVF S I+ V+D+D++ RFC+KF
Sbjct: 961 NVFFSSLPVIALGVFDQDVSARFCYKF 987
>At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase family
protein similar to Potential phospholipid-transporting
ATPase (EC 3.6.3.1) (Chromaffin granule ATPase) from
{Homo sapiens} SP|Q9Y2Q0, {Mus musculus} SP|P98200, {Bos
taurus} SP|Q29449; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase; ESTs gb|T45045 and
gb|AA394473 come from this gene
Length = 1203
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 318 NVFIFSXDTISSRVYDEDLTVRFCFKF 238
NVF S I+ V+D+D++ R+C+KF
Sbjct: 962 NVFFSSLPVIALGVFDQDVSARYCYKF 988
>At1g68710.1 68414.m07850 haloacid dehalogenase-like hydrolase family
protein similar to Potential phospholipid-transporting
ATPase (EC 3.6.3.1) from {Mus musculus} SP|P98200, {Bos
taurus} SP|Q29449, {Homo sapiens} SP|O43520; contains
InterPro accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1200
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 318 NVFIFSXDTISSRVYDEDLTVRFCFKF 238
NVF S I+ V+D+D++ R+C KF
Sbjct: 966 NVFFSSLPVIALGVFDQDVSARYCLKF 992
>At3g03970.3 68416.m00418 expressed protein
Length = 554
Score = 31.1 bits (67), Expect = 1.00
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 494 HIFVYQSTXLKAVGLEPTGFTVFRFVFGSCTFESGSKISKHL 369
H+FV Q + +K +GLE G+TV +F G KI+ H+
Sbjct: 43 HVFVAQLSDVKEIGLESGGYTV--SLFEDLARAHGVKIAPHI 82
>At3g03970.2 68416.m00417 expressed protein
Length = 554
Score = 31.1 bits (67), Expect = 1.00
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 494 HIFVYQSTXLKAVGLEPTGFTVFRFVFGSCTFESGSKISKHL 369
H+FV Q + +K +GLE G+TV +F G KI+ H+
Sbjct: 43 HVFVAQLSDVKEIGLESGGYTV--SLFEDLARAHGVKIAPHI 82
>At3g03970.1 68416.m00416 expressed protein
Length = 554
Score = 31.1 bits (67), Expect = 1.00
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 494 HIFVYQSTXLKAVGLEPTGFTVFRFVFGSCTFESGSKISKHL 369
H+FV Q + +K +GLE G+TV +F G KI+ H+
Sbjct: 43 HVFVAQLSDVKEIGLESGGYTV--SLFEDLARAHGVKIAPHI 82
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +3
Query: 666 PPXAXLPXVLPXXPSPXXTXPXCPXLWXXPCRXXMSPXPXXXLSPXXXXXPP 821
PP A P LP P P P P P ++P P ++P PP
Sbjct: 79 PPVATTPPALPPKPLP---PPLSPPQTTPPPPPAITPPPPPAITPPLSPPPP 127
>At3g27870.1 68416.m03475 haloacid dehalogenase-like hydrolase family
protein similar to Potential phospholipid-transporting
ATPase (EC 3.6.3.1) from {Mus musculus} SP|P98200, Homo
sapiens SP|O43520, {Arabidopsis thaliana} SP|P98204;
contains InterPro accession IPR005834: Haloacid
dehalogenase-like hydrolase
Length = 1174
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 318 NVFIFSXDTISSRVYDEDLTVRFCFKF 238
NVF S I+ V+D+D++ R C K+
Sbjct: 946 NVFFTSLPVIALGVFDQDVSARLCLKY 972
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +3
Query: 669 PXAXLPXVLPXXPSPXXTXPXCPXLWXXPCRXXMSPXPXXXLSPXXXXXPPXXP 830
P A +P V P P+P P P P P P +SP P P
Sbjct: 74 PPAPVPPVSPPPPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVP 127
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,414,196
Number of Sequences: 28952
Number of extensions: 178457
Number of successful extensions: 512
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2028915200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -