Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_E10
         (873 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    26   1.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   5.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   7.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   7.0  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   9.2  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
 Frame = +1

Query: 409 VAGQGQLVPQ*QPRPERQGVRDQELSQRHPQRAQLQHAGRRSGLHVQ-TEGGRIVERGAL 585
           VAG  Q   Q Q +P+RQ V   +  Q+  +R Q QH  R +    Q  E  R  +R   
Sbjct: 68  VAGMLQQQQQQQRQPQRQAVVGTQ--QQQQRRQQQQHQQRSNATQAQRREQLRNEQRRPA 125

Query: 586 *RHQPE*LLGRR*AEPVPIAVQLARLQRRLQE 681
              Q + +          +  +  RL  RLQE
Sbjct: 126 RLRQDQIIFEPAEGTSYKVLYEKIRLNPRLQE 157


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 522 WAAEWTTCSNRRWAHR 569
           W AE  T  + RWAHR
Sbjct: 881 WDAEADTSRHTRWAHR 896


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +3

Query: 702  DLRGSQMW----DSPSRNSSKKYYAKXVNHK 782
            D+RG +++    DS  R S KKYY + V  K
Sbjct: 2509 DVRGYRLYKYVYDSAGRLSRKKYYIRDVQGK 2539


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +3

Query: 702  DLRGSQMW----DSPSRNSSKKYYAKXVNHK 782
            D+RG +++    DS  R S KKYY + V  K
Sbjct: 2510 DVRGYRLYKYVYDSAGRLSRKKYYIRDVQGK 2540


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 19/67 (28%), Positives = 28/67 (41%)
 Frame = +2

Query: 494 IPNAPNFNTLGGGVDYMFKQKVGASLSAAHSDVINRNDYSAGGKLNLFRSPSSSLDFNAG 673
           +PN   +N L   +   F  +VG  L+  +   + R  Y    KL+   S    + F A 
Sbjct: 457 VPNLIPWNRLVEAISMTFSARVGRGLTDENMQYMYRKAYR--DKLSFSVSNDQMISF-AQ 513

Query: 674 FKKFDTP 694
           F K  TP
Sbjct: 514 FCKDTTP 520


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,912
Number of Sequences: 2352
Number of extensions: 13119
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)