Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_O18
(1070 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 31 1.7
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 30 2.3
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 5.3
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 7.0
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 28 9.2
At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 9.2
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 566 PTPXPXPXXXQXXXPXAXSPXXPXXPXTXXXXPPXXXKSXPKPP 697
P P P + P A P P P P K PKPP
Sbjct: 43 PVKPPKPPAVKPPKPPAVKPPTPKPPTVKPHPKPPTVKPHPKPP 86
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/55 (29%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +1
Query: 595 PTPXTXSXLXXXXXPXXNXXXPP-PXXXKIXPKTPXXXXXXPXNXXPPXXKPXTP 756
PTP + P PP P + P TP P PP P TP
Sbjct: 166 PTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVITPPTP 220
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 566 PTPXPXPXXXQXXXPXAXSPXXPXXPXTXXXXPPXXXKSXPKPPXTXK 709
PT P P + P P P P PP P PP T K
Sbjct: 57 PTHTPKPPTVKPPPPYIPCPPPPYTPKPPTVKPPPPPYVKPPPPPTVK 104
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +1
Query: 595 PTPXTXSXLXXXXXPXXNXXXPPPXXXKIXPKTPXXXXXXPXNXXPPXXKPXTPXXXTXP 774
PTP T P PPP P TP P PP P P T P
Sbjct: 125 PTPYTPPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCP--PPPPTPYPPPPKPETCP 182
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/57 (26%), Positives = 16/57 (28%)
Frame = +2
Query: 566 PTPXPXPXXXQXXXPXAXSPXXPXXPXTXXXXPPXXXKSXPKPPXTXKXXRXTXXPH 736
P P P P P P P P P S P PP + PH
Sbjct: 523 PPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPH 579
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/74 (24%), Positives = 20/74 (27%)
Frame = +3
Query: 648 PXXXXPPPXXNPXQNPPXXXXXSGXPXXPTXXTXHTXXXHXPXXPXXHX*XXXXPKXLPL 827
P PPP P +PP S P P+ P P P
Sbjct: 497 PPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPE 556
Query: 828 PXXKKXXFXPHSXP 869
P PHS P
Sbjct: 557 PYYYSSPPPPHSSP 570
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 566 PTPXPXPXXXQXXXPXAXSPXXPXXPXTXXXXPPXXXKSXPKPP 697
P P P P P SP P P PP K P PP
Sbjct: 72 PPPSPPPCPPPPSPPP--SPPPPQLPPPPQLPPPAPPKPQPSPP 113
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 566 PTPXPXPXXXQXXXPXAXSPXXPXXPXTXXXXPPXXXKSXPKPP 697
P P P P P P T PP KS P PP
Sbjct: 118 PHPTPKKSPSPPPTPSLPPPAPKKSPSTPSLPPPTPKKSPPPPP 161
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 637 PXXNXXXPPPXXXKIXPKTPXXXXXXPXNXXPPXXKP 747
P PPP + P TP P N PP P
Sbjct: 118 PPPESSPPPPPPTEAPPTTPITSPSPPTNPPPPPESP 154
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,463,207
Number of Sequences: 28952
Number of extensions: 44161
Number of successful extensions: 501
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2656839904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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