Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_O05
(869 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 39 0.006
SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 38 0.014
SB_20511| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8) 32 0.53
SB_18416| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.70
SB_35166| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 30 2.1
SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_45775| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 30 2.8
SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_12396| Best HMM Match : Myc-LZ (HMM E-Value=6.2e-10) 30 2.8
SB_50018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_35467| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_49793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85) 29 4.9
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 29 6.5
SB_59425| Best HMM Match : Adeno_VII (HMM E-Value=4.5) 28 8.6
SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2) 28 8.6
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3
Query: 330 HHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
HH+ D HH D HH D HH++LD HH+ D H
Sbjct: 434 HHVTRDSHHDTRDKHHDMRDKHHVKLDKHHVSRDKLH 470
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHH 241
H + HH D HH D HH++LD HH+ D H
Sbjct: 434 HHVTRDSHHDTRDKHHDMRDKHHVKLDKHHVSRDKLH 470
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -3
Query: 447 SFYFQLIS-MFAVTSLVYSSLRETAATISGLGCHQIRXGYHHIRPDYHHIRXDCHHIRLD 271
+F F IS +F+ +SL S ++++ L CH+ R HH RP HH CH RL
Sbjct: 202 AFVFPFISSIFSSSSLSPPSSLQSSSPSRHLHCHRPRLSNHH-RPSRHH---HCHRPRLS 257
Query: 270 CHH 262
HH
Sbjct: 258 NHH 260
Score = 33.5 bits (73), Expect = 0.23
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Frame = -3
Query: 360 LGCHQIRXGYHHIRPD----YHHIRXDCHHIRLDCH---HIRLDYHHIRP 232
L CH+ R YHH RP YH R HH H H L ++H+RP
Sbjct: 369 LYCHRPRLSYHH-RPSRHLHYHRFRLSIHHHPSSRHHHCHRPLLFNHLRP 417
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 360 LGCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHI 238
L +++R HH HH CH +RL HH Y H+
Sbjct: 283 LHSNRLRLSIHHHPSSRHH---HCHRLRLSNHHRPSRYLHV 320
>SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 1021
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 429 ISMFAVTSLVYSSLRETAATISGLGCHQIRXGYHHIRP--DYHHIRXDCHHIRLD-CHHI 259
++ A+TSL+Y T + G+ CH IR HH+ YH ++ +H+ D HH+
Sbjct: 472 VTHHAITSLMYHVKGVTHYAMKGVTCHVIRGVKHHVMKGVTYHVMKGVTYHVMRDVTHHV 531
Query: 258 R 256
+
Sbjct: 532 K 532
>SB_20511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 33.5 bits (73), Expect = 0.23
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = -3
Query: 357 GCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
G Q+ G +H+ + H+ D H+ + +H+++D H+ D ++T
Sbjct: 322 GPSQVLDGTNHVLRESDHVLRDSKHVLRESNHVQVDSCHVAGDPYYT 368
>SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8)
Length = 581
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 324 IRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
++ D+HH HH+ CH R YHH+ D HH
Sbjct: 226 VKHDHHHYH---HHL---CHDRRHHYHHVHYDHHH 254
Score = 29.5 bits (63), Expect = 3.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 354 CHQIRXGYHHIRPDYHH 304
CH R YHH+ D+HH
Sbjct: 238 CHDRRHHYHHVHYDHHH 254
>SB_18416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 31.9 bits (69), Expect = 0.70
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIR 235
H+I G H I D H I H I D H I +YH R
Sbjct: 12 HEILEGEHEILEDEHEILEGEHEILEDEHEILEEYHDFR 50
>SB_35166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = -3
Query: 459 NNTVSFYFQLISMFAVTSLVYSSLRETAATISGLGCHQIRXGYHHIRPDYHHIRXDCHHI 280
+N + +F S + +S + A I H I GY H+ P Y H+ H+
Sbjct: 22 SNLIIDFFAFCSFLLLVGFRHSRTSASYAYIIPSYAHVIS-GYAHVIPGYAHVLSSYAHV 80
Query: 279 RLDCHHIRLDYHHI 238
H+ +Y H+
Sbjct: 81 ICSYAHVIPNYAHV 94
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = -3
Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
HQ +HH +HH HH HH YHH HH
Sbjct: 211 HQHHQHHHH----HHHQHNHHHHHHNHHHHHHHHYHHYHHHHHH 250
>SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -3
Query: 396 SSLRETAATISGLGCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHI 259
SS +++++S + YHH HH+ HH LD H I
Sbjct: 242 SSSSSSSSSLSSSSSSPLSSYYHHHHHRRHHLNHYHHHYHLDDHFI 287
>SB_45775| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 584
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -3
Query: 357 GCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHI 238
G H++ GYH + YH + H + H + YH +
Sbjct: 258 GYHEVPRGYHEVPYGYHAVPHGYHAVPHGYHEVPHGYHAV 297
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -3
Query: 357 GCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
G +++ GYH + YH + H + H + YH + P +H
Sbjct: 251 GYYEVPHGYHEVPRGYHEVPYGYHAVPHGYHAVPHGYHEV-PHGYH 295
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -3
Query: 357 GCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
G H + GY+ + YH + H + H + YH + P +H
Sbjct: 244 GYHAVPHGYYEVPHGYHEVPRGYHEVPYGYHAVPHGYHAV-PHGYH 288
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = -3
Query: 357 GCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
G +++ GYH + Y+ + H + H + YH + P +H
Sbjct: 237 GYYEVPHGYHAVPHGYYEVPHGYHEVPRGYHEVPYGYHAV-PHGYH 281
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -3
Query: 357 GCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
G H++ GYH + YH + H + H + Y+ + P +H
Sbjct: 265 GYHEVPYGYHAVPHGYHAVPHGYHEVPHGYHAVPHGYNEV-PHGYH 309
>SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 345 IRXGYHHIRPDYHHIRXDC--HHIRLDCHHIRLDYHHIRPDCHH 220
+R YH R Y R HH R +H RL YHH RP +H
Sbjct: 215 LRCYYHCRRRCYRRRRRHFYHHHPRRYHNHRRLRYHHHRPIFYH 258
>SB_12396| Best HMM Match : Myc-LZ (HMM E-Value=6.2e-10)
Length = 293
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 330 HHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
HH + + H R + H R + HIR + H R + HT
Sbjct: 81 HHTQNNSSHTRNNWSHTRNNSSHIRNNSSHTRKNSSHT 118
>SB_50018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
++ R + IR D + I+ D R+D + R+D + IR D + T
Sbjct: 101 NRTRIDLNRIRTDRNRIKIDPDRTRIDRNRTRIDLNRIRTDRNRT 145
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -3
Query: 357 GC-HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
GC H+++ H +HH HH HH HH HH
Sbjct: 245 GCYHKLKNPRHRYHHHHHHHHQHNHHQHHHHHHHHHHNHHHHHQQHH 291
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -3
Query: 342 RXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
R YHH +H HH HH +HH + HH
Sbjct: 254 RHRYHHHHHHHHQHNHHQHHHHHHHHHHNHHHHHQQHHHHH 294
>SB_35467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/81 (20%), Positives = 28/81 (34%)
Frame = -3
Query: 462 FNNTVSFYFQLISMFAVTSLVYSSLRETAATISGLGCHQIRXGYHHIRPDYHHIRXDCHH 283
F + S Y S +A + Y+ + A ++ H + Y H Y H+ H
Sbjct: 236 FAHVTSSYAHATSSYAHATSSYAHATSSFAHVTSSHAH-VTTSYAHATSSYAHVTSSHAH 294
Query: 282 IRLDCHHIRLDYHHIRPDCHH 220
H+ Y H+ H
Sbjct: 295 ATSSYAHVTTSYAHVTSSHAH 315
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/81 (17%), Positives = 32/81 (39%)
Frame = -3
Query: 462 FNNTVSFYFQLISMFAVTSLVYSSLRETAATISGLGCHQIRXGYHHIRPDYHHIRXDCHH 283
+ + S + + S +A + Y+ + + A ++ H + Y H+ Y H+ H
Sbjct: 334 YAHATSSFAHVTSSYAHATSSYAHVTSSHAHVTSSHAH-VTTSYAHVTSSYAHVTSSHAH 392
Query: 282 IRLDCHHIRLDYHHIRPDCHH 220
+ H+ + H+ H
Sbjct: 393 VTSSHAHVTSSHAHVTSSYTH 413
>SB_49793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCH 223
H R YH R YH R H R H R YH R H
Sbjct: 14 HMARRPYHVARRPYHMARHPYHVARRLYHMARRPYHVARRPYH 56
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCH 223
H R YH R YH R H R H R YH R H
Sbjct: 7 HVARRPYHMARRPYHVARRPYHMARHPYHVARRLYHMARRPYH 49
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCH 223
H R YH R YH R H R H R YH R H
Sbjct: 21 HVARRPYHMARHPYHVARRLYHMARRPYHVARRPYHVARRPYH 63
>SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85)
Length = 377
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/44 (43%), Positives = 19/44 (43%)
Frame = -3
Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H I YH Y H D HH D HH DYHH D HH
Sbjct: 80 HVIEPHYHDDYHYYDHHYDDYHHD--DYHH---DYHH--HDYHH 116
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
YH I P YH H D HH DYHH D HH
Sbjct: 79 YHVIEPHYHDDYHYYDHHYDDYHHD--DYHH---DYHH 111
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 364 GYGGGGFPQGRVDQGGY 414
GYGGGG+ GR GGY
Sbjct: 213 GYGGGGYGGGRSGGGGY 229
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 364 GYGGGGFPQGRVDQGGYREHGY 429
GYGGGG+ G GGY GY
Sbjct: 175 GYGGGGYGGGGHGGGGYGGGGY 196
>SB_59425| Best HMM Match : Adeno_VII (HMM E-Value=4.5)
Length = 250
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -3
Query: 357 GCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCH 223
G H+I+ I+ H I+ H ++ H I+ H I+ H
Sbjct: 46 GAHRIKYRARRIKTRAHRIKSPAHGMKSRAHSIKSRAHRIKSRAH 90
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -3
Query: 357 GCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCH 223
G H+I+ I+ H I+ H ++ H I+ H I+ H
Sbjct: 116 GAHRIKYRARRIKTRAHRIKSPAHGMKSRAHSIKSRAHRIKSRAH 160
>SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2)
Length = 238
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHH 241
YHH YHH HH+ D HH YHH
Sbjct: 94 YHHKWQHYHHHHHYHHHLDYD-HH----YHH 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,845,418
Number of Sequences: 59808
Number of extensions: 174925
Number of successful extensions: 948
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2491217872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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