Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O03
         (855 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.33 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.1  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   5.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   7.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   7.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.4  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
            protein.
          Length = 947

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +3

Query: 417  FKRKQPGRRPXCTGGRTSRISRCVXCSEI*STRRCGSAR 533
            F+ K+       +GG T+R+ RCV      + R  G  R
Sbjct: 898  FRMKKSSALRPASGGTTARVVRCVCAGSTGTRRATGCGR 936


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 331 GQLSRMGVHLEYHEGER 381
           G+ S +  HL +H GER
Sbjct: 327 GKTSHLKAHLRWHTGER 343


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 344 EWEYTSNITKEN 379
           +WEY +N  KEN
Sbjct: 144 DWEYPANADKEN 155


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 580 RIPFQIQFSSKLGIXRLAEPQRL 512
           ++ F+++F  KLG  RL   QRL
Sbjct: 182 QLRFKLRFFEKLGNRRLGFVQRL 204


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 580 RIPFQIQFSSKLGIXRLAEPQRL 512
           ++ F+++F  KLG  RL   QRL
Sbjct: 182 QLRFKLRFFEKLGNRRLGFVQRL 204


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 146 KTSLMLFFCWFEF 108
           KTS  L+ CW EF
Sbjct: 225 KTSGSLYTCWSEF 237


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 669 WRIFQLSQVPKIDHIYSHSCTSRSS 595
           W ++ LSQ     HI+S +C   SS
Sbjct: 221 WLVWLLSQAWISVHIWSPNCDKLSS 245


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 669 WRIFQLSQVPKIDHIYSHSCTSRSS 595
           W ++ LSQ     HI+S +C   SS
Sbjct: 454 WLVWLLSQAWISVHIWSPNCDKLSS 478


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 669 WRIFQLSQVPKIDHIYSHSCTSRSS 595
           W ++ LSQ     HI+S +C   SS
Sbjct: 454 WLVWLLSQAWISVHIWSPNCDKLSS 478


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,250
Number of Sequences: 336
Number of extensions: 3198
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)