Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O03
         (855 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0)                40   0.002
SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.003
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)                     40   0.003
SB_42630| Best HMM Match : Ets (HMM E-Value=0)                         30   2.8  
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.8  
SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24)                  29   3.6  
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.4  

>SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0)
          Length = 663

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 630 DLSLEPEITEIFSTSQDPEELXXAWVEWXNAAXATAXXNFXDYVNLYNEAA 782
           +LSL P++TE+ + S++  EL  AW +W           F D V L N+ A
Sbjct: 142 NLSLNPQLTELMANSRNSPELLAAWRDWRQVTGPKMRPLFKDCVTLANQGA 192


>SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1049

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = +3

Query: 555 ENCIWNGIRTTPLAKICSYKNESKCDLSLEPEITEIFSTSQDPEELXXAWVEWXNAAXAT 734
           ++ I N        K+C     +   +SL+P++  + S S++ +EL  AW  W +A    
Sbjct: 253 QSLITNMTEIYSTGKVCLNITRNNTCMSLDPDLGNLMSRSRNQDELVWAWRGWRDAVAPP 312

Query: 735 AXXNFXDYVNLYNEAA 782
               F   V+L N+ A
Sbjct: 313 VRGMFQQMVDLLNKGA 328


>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 657

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = +3

Query: 555 ENCIWNGIRTTPLAKICSYKNESKCDLSLEPEITEIFSTSQDPEELXXAWVEWXNAAXAT 734
           ++ I N        K+C     +   +SL+P++  + S S++ +EL  AW  W +A    
Sbjct: 537 QSLITNMTEIYSTGKVCLNITRNNTCMSLDPDLGNLMSRSRNQDELVWAWRGWRDAVAPP 596

Query: 735 AXXNFXDYVNLYNEAA 782
               F   V+L N+ A
Sbjct: 597 VRGMFQQMVDLLNKGA 612


>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
          Length = 631

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 260 EAREHEAREYMLHLDKATGLRKNRASLAEWEYTSNITKENEEXSIQLTWSSR 415
           E+RE  + +      K  G RK   SL  WE+   + +  E     +TW SR
Sbjct: 509 ESREAGSSKSANAAKKPPGRRKQTRSLHLWEFLKELLENEETCPRYITWISR 560


>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 977

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 260  EAREHEAREYMLHLDKATGLRKNRASLAEWEYTSNITKENEEXSIQLTWSSR 415
            E+RE  + +      K  G RK   SL  WE+   + +  E     +TW SR
Sbjct: 855  ESREAGSSKSANAAKKPPGRRKQTRSLHLWEFLKELLENEETCPRYITWISR 906


>SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24)
          Length = 429

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 603 CSYKNESKCDLSLEPEITEIFSTSQD-PEELXXAW 704
           CS K+ S CDL  +P+ + +  TSQ+ P+ +   W
Sbjct: 179 CSDKDTSACDLRTKPQSSTVCGTSQECPKWIIGNW 213


>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2529

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -3

Query: 673 LVENISVISGSKDRSHLLSFLYEQIFASGVVRIPFQIQFSSKLGIXRLAEPQR 515
           +VE+   ISG  D    L   + +++    V+    + FSS+L I RL  P R
Sbjct: 409 IVEDGKEISGQADIFQNLQSYFSRLYERKSVKTEECLTFSSELNIPRLQAPHR 461


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,689,027
Number of Sequences: 59808
Number of extensions: 408439
Number of successful extensions: 931
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)