Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N17
(888 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.058
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 32 0.54
SB_23131| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.71
SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45) 31 1.6
SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0) 31 1.6
SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 5.0
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 5.0
SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_51975| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_53951| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_14664| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_7587| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-13) 28 8.8
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 35.5 bits (78), Expect = 0.058
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = +2
Query: 533 LGPXPHLNXXX--KXPXXGKLGXLXPXXEPLXPPKXXFTXPXXPPFYXPRSXGEGXKGFF 706
+ P PHL + P K P +PL PP+ P P PR
Sbjct: 1011 IDPVPHLKPPGPTEQPVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPA 1070
Query: 707 PP*XXPPPP 733
PP PPPP
Sbjct: 1071 PPPRQPPPP 1079
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 32.3 bits (70), Expect = 0.54
Identities = 19/66 (28%), Positives = 23/66 (34%)
Frame = +2
Query: 539 PXPHLNXXXKXPXXGKLGXLXPXXEPLXPPKXXFTXPXXPPFYXPRSXGEGXKGFFPP*X 718
P H + P + P EP PP P PP P+ + PP
Sbjct: 529 PLGHTTAHYQVPIPAVAPAVTPSEEPPPPPPGVDIPPPLPPSEDPKPPPPPPE---PPEE 585
Query: 719 XPPPPP 736
PPPPP
Sbjct: 586 CPPPPP 591
>SB_23131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 56 LSTFVSERFTKMAKR---TKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTC 205
+ST S + K+ R T+ GIT T Y +S +K+V + T+ A TC
Sbjct: 1 MSTHYSSPYKKLVPRQLTTRWSGITCMMSTHYSSSYKKLVPRQLTTRWASITC 53
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 56 LSTFVSERFTKMAKR---TKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTC 205
+ST S + K+ R T+ IT T Y +S +K+V + T+ + TC
Sbjct: 28 MSTHYSSSYKKLVPRQLTTRWASITCMMSTHYSSSYKKLVPRSLTTRWSGITC 80
>SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45)
Length = 1102
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKKXXXXXXPGAG 475
KKKKKK KKK K KK K P G
Sbjct: 379 KKKKKKKKKKKKKKKKKKNSVELTMPAPG 407
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 372 KKKKKKKKKKKKKKKKKKK 390
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 373 KKKKKKKKKKKKKKKKKKK 391
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 374 KKKKKKKKKKKKKKKKKKK 392
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 375 KKKKKKKKKKKKKKKKKKK 393
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 376 KKKKKKKKKKKKKKKKKKK 394
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 377 KKKKKKKKKKKKKKKKKKK 395
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 378 KKKKKKKKKKKKKKKKKKK 396
>SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1358
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKKXXXXXXPGAG 475
KKKKKK KKK K KK K P G
Sbjct: 74 KKKKKKKKKKKKKKKKKKNSVELTMPAPG 102
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 67 KKKKKKKKKKKKKKKKKKK 85
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 68 KKKKKKKKKKKKKKKKKKK 86
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 69 KKKKKKKKKKKKKKKKKKK 87
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 70 KKKKKKKKKKKKKKKKKKK 88
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 71 KKKKKKKKKKKKKKKKKKK 89
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 72 KKKKKKKKKKKKKKKKKKK 90
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 73 KKKKKKKKKKKKKKKKKKK 91
>SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 149 KKKKKKKKKKKKKKKKKKK 167
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 150 KKKKKKKKKKKKKKKKKKK 168
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 151 KKKKKKKKKKKKKKKKKKK 169
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 152 KKKKKKKKKKKKKKKKKKK 170
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 153 KKKKKKKKKKKKKKKKKKK 171
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 154 KKKKKKKKKKKKKKKKKKK 172
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 155 KKKKKKKKKKKKKKKKKKK 173
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 156 KKKKKKKKKKKKKKKKKKK 174
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 157 KKKKKKKKKKKKKKKKKKK 175
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 158 KKKKKKKKKKKKKKKKKKK 176
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 159 KKKKKKKKKKKKKKKKKKK 177
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 160 KKKKKKKKKKKKKKKKKKK 178
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 161 KKKKKKKKKKKKKKKKKKK 179
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 162 KKKKKKKKKKKKKKKKKKK 180
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 163 KKKKKKKKKKKKKKKKKKK 181
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 164 KKKKKKKKKKKKKKKKKKK 182
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 165 KKKKKKKKKKKKKKKKKKK 183
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 166 KKKKKKKKKKKKKKKKKKK 184
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 167 KKKKKKKKKKKKKKKKKKK 185
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 168 KKKKKKKKKKKKKKKKKKK 186
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 169 KKKKKKKKKKKKKKKKKKK 187
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 170 KKKKKKKKKKKKKKKKKKK 188
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 171 KKKKKKKKKKKKKKKKKKK 189
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 172 KKKKKKKKKKKKKKKKKKK 190
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK K+
Sbjct: 173 KKKKKKKKKKKKKKKKKKE 191
>SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 344 KKKKKKKKKKKKKKKKKKK 362
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 345 KKKKKKKKKKKKKKKKKKK 363
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 346 KKKKKKKKKKKKKKKKKKK 364
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 347 KKKKKKKKKKKKKKKKKKK 365
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK KK
Sbjct: 26 KKKKKKKKKKKKKNKKNKK 44
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KK+KKK KKK K KK KK
Sbjct: 17 KKRKKKKQKKKKKKKKKKK 35
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
K+KKKK KKK K KK KK
Sbjct: 18 KRKKKKQKKKKKKKKKKKK 36
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKK+K KKK K KK KK
Sbjct: 20 KKKKQKKKKKKKKKKKKKK 38
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
K+KKKK KKK K KK KK
Sbjct: 23 KQKKKKKKKKKKKKKKNKK 41
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 624 PPKXXLXPPXXLXFIXHVPXGRVXKGFSPXKXXPPPPPGXXXXXPFLXXPFPP 782
PP PP P GR + P PPPPPG + P PP
Sbjct: 342 PPPPISKPPTSTRSAPPPPPGRAPQ---PLGGPPPPPPGRRPPSGKINPPPPP 391
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 624 PPKXXLXPPXXLXFIXHVPXGRVXKGFSPXKXXPPPPPGXXXXXPFLXXPFPP 782
PP PP P GR + P PPPPPG + P PP
Sbjct: 254 PPPPISKPPTSTRSAPPPPPGRAPQ---PLGGPPPPPPGRRPPSGKINPPPPP 303
>SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2337
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK K+
Sbjct: 1138 KKKKKKKKKKKKKKKKKKR 1156
>SB_51975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 76 EVYQNGQTYQKGWNYWQIWHTLRCL 150
+ YQ + GW WQIW LR +
Sbjct: 644 DTYQGRPLMKYGWLKWQIWRALRLI 668
>SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 683 GEGXKGFFPP*XXPPPPP 736
GEG G PP PPPPP
Sbjct: 786 GEGVGGITPPPPPPPPPP 803
>SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKK+K KKK K KK KK
Sbjct: 6 KKKKQKKKKKKRKKKKQKK 24
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K +K KK
Sbjct: 11 KKKKKKRKKKKQKKQKKKK 29
>SB_53951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKKKKK KKK K KK K
Sbjct: 113 KKKKKKKKKKKKKKKKINK 131
>SB_14664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KKK KK KKK K KK KK
Sbjct: 24 KKKSKKKIKKKKKKKKKKK 42
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 389 KKKKKKXXKKKXKXKKXKK 445
KK KKK KKK K KK KK
Sbjct: 25 KKSKKKIKKKKKKKKKKKK 43
>SB_7587| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-13)
Length = 351
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 143 GASLRKMVKKMEVTQHAKYTCSFCGK 220
G +K ++ E++ H KY CS CGK
Sbjct: 210 GGVTKKQIQSNEIS-HKKYVCSTCGK 234
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,722,790
Number of Sequences: 59808
Number of extensions: 382859
Number of successful extensions: 1497
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2538363813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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