BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP03_F_N05 (860 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 50 8e-05 UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002 UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005 UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.046 UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.081 UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 37 0.57 UniRef50_A5JUU8 Cluster: Formin B; n=2; Trypanosoma brucei|Rep: ... 36 1.7 UniRef50_O43516 Cluster: WAS/WASL-interacting protein family mem... 35 3.0 UniRef50_A4M4S8 Cluster: Putative uncharacterized protein precur... 34 4.0 UniRef50_Q8L685 Cluster: Pherophorin-dz1 protein precursor; n=1;... 34 4.0 UniRef50_A0CZ14 Cluster: Chromosome undetermined scaffold_31, wh... 34 4.0 UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.3 UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3 UniRef50_O95466 Cluster: Formin-like protein 1; n=39; Tetrapoda|... 34 5.3 UniRef50_Q7Z5R6 Cluster: Amyloid beta A4 precursor protein-bindi... 34 5.3 UniRef50_Q38EF1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0 UniRef50_A7RKG0 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.0 UniRef50_A7RJG2 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.0 UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thalian... 33 9.3 UniRef50_A6R957 Cluster: Cytokinesis protein sepA; n=1; Ajellomy... 33 9.3 UniRef50_O00401 Cluster: Neural Wiskott-Aldrich syndrome protein... 33 9.3 >UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE - Myxococcus xanthus Length = 486 Score = 50.0 bits (114), Expect = 8e-05 Identities = 24/35 (68%), Positives = 25/35 (71%) Frame = +1 Query: 331 CINESANARGEAVCVLGALPLPRSLTRCARSFGCG 435 CI + A AR EAV VL ALPL RS TRC RS GCG Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCG 300 >UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40 (SV40) Length = 364 Score = 45.2 bits (102), Expect = 0.002 Identities = 19/19 (100%), Positives = 19/19 (100%) Frame = +2 Query: 134 DPDMIRYIDEFGQTTTRMQ 190 DPDMIRYIDEFGQTTTRMQ Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364 >UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; Escherichia coli|Rep: Putative uncharacterized protein - Escherichia coli Length = 147 Score = 44.0 bits (99), Expect = 0.005 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = +1 Query: 355 RGEAVCVLGALPLPRSLTRCARSFGCGE 438 R +C G +PLPRSLTR ARSFGCGE Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGE 53 >UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Magnoliophyta|Rep: Putative reverse transcriptase - Zingiber officinale (Ginger) Length = 49 Score = 40.7 bits (91), Expect = 0.046 Identities = 16/17 (94%), Positives = 17/17 (100%) Frame = +2 Query: 329 SALMNRPTRGERRFAYW 379 +ALMNRPTRGERRFAYW Sbjct: 25 AALMNRPTRGERRFAYW 41 >UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterobacteriaceae|Rep: Lactose operon repressor - Escherichia coli (strain K12) Length = 360 Score = 39.9 bits (89), Expect = 0.081 Identities = 19/24 (79%), Positives = 21/24 (87%) Frame = -1 Query: 401 ERGSGRAPNTQTASPRALADSLMQ 330 +R + APNTQTASPRALADSLMQ Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348 >UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-hemolysin - Aeromonas hydrophila Length = 59 Score = 37.1 bits (82), Expect = 0.57 Identities = 17/20 (85%), Positives = 17/20 (85%) Frame = +3 Query: 450 HSKAVIXLSXESGDNAGXNM 509 HSKAVI LS ESGDNAG NM Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59 >UniRef50_A5JUU8 Cluster: Formin B; n=2; Trypanosoma brucei|Rep: Formin B - Trypanosoma brucei TREU927 Length = 1004 Score = 35.5 bits (78), Expect = 1.7 Identities = 14/27 (51%), Positives = 14/27 (51%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PPPPG K PP P PPPPP Sbjct: 491 PPPPGGKLPPPPPPPPGGKLPPPPPPP 517 Score = 33.5 bits (73), Expect = 7.0 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = +1 Query: 700 GGXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792 G PPPPG K PP PPPPP Sbjct: 518 GKAPPPPPGGKLPPPPPPGGKGAPPPPPPPP 548 >UniRef50_O43516 Cluster: WAS/WASL-interacting protein family member 1; n=34; Euteleostomi|Rep: WAS/WASL-interacting protein family member 1 - Homo sapiens (Human) Length = 503 Score = 34.7 bits (76), Expect = 3.0 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = +1 Query: 703 GXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792 G PPPP ++ PP P PPPPP Sbjct: 355 GPLPPPPSERPPPPVRDPPGRSGPLPPPPP 384 >UniRef50_A4M4S8 Cluster: Putative uncharacterized protein precursor; n=1; Geobacter bemidjiensis Bem|Rep: Putative uncharacterized protein precursor - Geobacter bemidjiensis Bem Length = 210 Score = 34.3 bits (75), Expect = 4.0 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PPPP K PP P+ PPPPP Sbjct: 99 PPPPPVKLPPPPPPMPVAQPVPPPPPP 125 >UniRef50_Q8L685 Cluster: Pherophorin-dz1 protein precursor; n=1; Volvox carteri f. nagariensis|Rep: Pherophorin-dz1 protein precursor - Volvox carteri f. nagariensis Length = 1009 Score = 34.3 bits (75), Expect = 4.0 Identities = 13/27 (48%), Positives = 13/27 (48%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PPPP PP PL PPPPP Sbjct: 224 PPPPSPPPPPPSPPPPLPPPPPPPPPP 250 Score = 33.5 bits (73), Expect = 7.0 Identities = 13/27 (48%), Positives = 13/27 (48%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PPPP PP PL PPPPP Sbjct: 659 PPPPPPPPPPPPPPPPLPPSPPPPPPP 685 >UniRef50_A0CZ14 Cluster: Chromosome undetermined scaffold_31, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_31, whole genome shotgun sequence - Paramecium tetraurelia Length = 417 Score = 34.3 bits (75), Expect = 4.0 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PP PG++ PP PL PPPPP Sbjct: 336 PPIPGQQNPPPPPPPPLPGQQAPPPPP 362 >UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma factor - Lentisphaera araneosa HTCC2155 Length = 201 Score = 33.9 bits (74), Expect = 5.3 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +2 Query: 212 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 379 + DA F+ I N +N+++C + +V +VWE + P RG +F YW Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85 >UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; Methanocorpusculum labreanum Z|Rep: Putative uncharacterized protein - Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) Length = 109 Score = 33.9 bits (74), Expect = 5.3 Identities = 21/55 (38%), Positives = 28/55 (50%) Frame = -2 Query: 292 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 128 +MNA V + FIAA + +T + AFF L S G ++VSY VW L Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76 >UniRef50_O95466 Cluster: Formin-like protein 1; n=39; Tetrapoda|Rep: Formin-like protein 1 - Homo sapiens (Human) Length = 1100 Score = 33.9 bits (74), Expect = 5.3 Identities = 13/30 (43%), Positives = 14/30 (46%) Frame = +1 Query: 703 GXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792 G PPPP PP P+ PPPPP Sbjct: 582 GDLPPPPPPPPPPPGTDGPVPPPPPPPPPP 611 >UniRef50_Q7Z5R6 Cluster: Amyloid beta A4 precursor protein-binding family B member 1- interacting protein; n=34; Euteleostomi|Rep: Amyloid beta A4 precursor protein-binding family B member 1- interacting protein - Homo sapiens (Human) Length = 666 Score = 33.9 bits (74), Expect = 5.3 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = +1 Query: 700 GGXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792 GG P PP PP PL PPPPP Sbjct: 543 GGGLPAPPDDFLPPPPPPPPLDDPELPPPPP 573 >UniRef50_Q38EF1 Cluster: Putative uncharacterized protein; n=1; Trypanosoma brucei|Rep: Putative uncharacterized protein - Trypanosoma brucei Length = 576 Score = 33.5 bits (73), Expect = 7.0 Identities = 13/27 (48%), Positives = 13/27 (48%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PPPP K PP P PPPPP Sbjct: 530 PPPPPPKAPPPKGPPPKVAPPPPPPPP 556 >UniRef50_A7RKG0 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 404 Score = 33.5 bits (73), Expect = 7.0 Identities = 13/27 (48%), Positives = 13/27 (48%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PPPPG PP P PPPPP Sbjct: 341 PPPPGGAGPPPPPPPPPPGLPAPPPPP 367 >UniRef50_A7RJG2 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 2195 Score = 33.5 bits (73), Expect = 7.0 Identities = 13/27 (48%), Positives = 13/27 (48%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PPPPG PP P PPPPP Sbjct: 952 PPPPGGAGPPPPPPPPPPGLPAPPPPP 978 >UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana (Mouse-ear cress) Length = 1289 Score = 33.1 bits (72), Expect = 9.3 Identities = 13/27 (48%), Positives = 13/27 (48%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PPPPG PP P PPPPP Sbjct: 974 PPPPGYGSPPPPPPPPPSYGSPPPPPP 1000 >UniRef50_A6R957 Cluster: Cytokinesis protein sepA; n=1; Ajellomyces capsulatus NAm1|Rep: Cytokinesis protein sepA - Ajellomyces capsulatus NAm1 Length = 1670 Score = 33.1 bits (72), Expect = 9.3 Identities = 13/27 (48%), Positives = 13/27 (48%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PPPPG PP P PPPPP Sbjct: 970 PPPPGMGGPPPPPPPPGAGPGGPPPPP 996 >UniRef50_O00401 Cluster: Neural Wiskott-Aldrich syndrome protein; n=39; Eukaryota|Rep: Neural Wiskott-Aldrich syndrome protein - Homo sapiens (Human) Length = 505 Score = 33.1 bits (72), Expect = 9.3 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = +1 Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792 PPPP + PP P PPPPP Sbjct: 336 PPPPNRMYPPPPPALPSSAPSGPPPPP 362 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 566,519,346 Number of Sequences: 1657284 Number of extensions: 8585884 Number of successful extensions: 56667 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 23978 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 43223 length of database: 575,637,011 effective HSP length: 100 effective length of database: 409,908,611 effective search space used: 76243001646 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -