Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N03
(871 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.30
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 4.9
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 4.9
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 29 4.9
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 4.9
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_5403| Best HMM Match : TSP_1 (HMM E-Value=0) 29 4.9
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 4.9
SB_50139| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5) 29 6.5
SB_32130| Best HMM Match : TSP_1 (HMM E-Value=0) 29 6.5
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 23 7.7
SB_41722| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 28 8.6
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 23 9.3
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PPP PPPP P PP P PP PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 397 PPPPPPPPPPPPPPPPPP 414
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 398 PPPPPPPPPPPPPPPPPP 415
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 399 PPPPPPPPPPPPPPPPPP 416
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 400 PPPPPPPPPPPPPPPPPP 417
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 401 PPPPPPPPPPPPPPPPPP 418
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 404 PPPPPPPPPPPPPPPAPP 421
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 405 PPPPPPPPPPPPPPAPPP 422
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 406 PPPPPPPPPPPPPAPPPP 423
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 408 PPPPPPPPPPPAPPPPPP 425
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 409 PPPPPPPPPPAPPPPPPP 426
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 410 PPPPPPPPPAPPPPPPPP 427
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 411 PPPPPPPPAPPPPPPPPP 428
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 730 PPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PP PPPP P PP P PP PP
Sbjct: 354 PPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPP 400
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 683 PPPPPPPPPPPPPPPPPP 700
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 684 PPPPPPPPPPPPPPPPPP 701
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 691 PPPPPPPPPPPQPSTPPP 708
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 694 PPPPPPPPQPSTPPPPPP 711
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 867 PPPPPPPPPPPPPPPPPP 884
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 868 PPPPPPPPPPPPPPPPPP 885
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 464 PPPPPPPPPPPPPPPPPP 481
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 465 PPPPPPPPPPPPPPPPPP 482
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 466 PPPPPPPPPPPPPPPPPP 483
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 467 PPPPPPPPPPPPPPPPPP 484
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 468 PPPPPPPPPPPPPPPPPP 485
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 469 PPPPPPPPPPPPPPPPPP 486
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 470 PPPPPPPPPPPPPPPPPP 487
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 473 PPPPPPPPPPPPPPPFPP 490
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 474 PPPPPPPPPPPPPPFPPP 491
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 475 PPPPPPPPPPPPPFPPPP 492
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 477 PPPPPPPPPPPFPPPPPP 494
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 83 PPPPPPPPASNVPAPPPP 100
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 54 PPPPPPPPPPPPPPPPPP 71
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 195 PPPPPPPPPPGFPGGAPP 212
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 400 PEPSYTLPLPPTRNEGPMSQYC 335
P P + P PP N GP +YC
Sbjct: 214 PPPPFGAPPPPALNGGPPREYC 235
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 1159 PPPPPPPPPPSSPSPPPP 1176
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 1161 PPPPPPPPSSPSPPPPPP 1178
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 102 PPPPPPPPPPPPPPPPPP 119
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 103 PPPPPPPPPPPPPPPPPP 120
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 1311 PPPPPPPPPPPPPPPLPP 1328
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 363 PPPPPPPPVGGPPPPPPP 380
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PPP PPPP P P P PP PP
Sbjct: 163 PPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPP 210
>SB_5403| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 684
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 331 PCNTGTSDPRSWWEVTARCTRAPAGCTSARTPTGTTRGPS 450
P N G SD SW + CT++ +G T RT T T PS
Sbjct: 410 PVNGGWSDYSSW----SSCTKSCSGGTRTRTRTCTNPKPS 445
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 215 PPPPPPPPSPSPPRPPPP 232
>SB_50139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 331 PCNTGTSDPRSWWEVTARCTRAPAGCTSARTPTGTTRGPS 450
P N G SD SW + CT++ G T RT T T PS
Sbjct: 379 PVNGGWSDYSSW----SSCTKSCGGGTRTRTRTCTNPKPS 414
>SB_44812| Best HMM Match : DUF586 (HMM E-Value=6.5)
Length = 520
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +1
Query: 286 AARSSCGISRPTTWRPCNTGTSDPRSWWEVTARCTRAPAGCTSARTPTGTTRGPS 450
+ R S G S TWR + T +P C A CT T T+RG S
Sbjct: 138 SGRPSPGSSSTPTWRSGKSYTQEPNRLASSWRSCCATAAACTPLTTQE-TSRGSS 191
>SB_32130| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 446
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 331 PCNTGTSDPRSWWEVTARCTRAPAGCTSARTPTGTTRGPS 450
P N G SD SW + CT++ G T RT T T PS
Sbjct: 294 PVNGGWSDYSSW----SSCTKSCGGGTRTRTRTCTNPKPS 329
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 23.4 bits (48), Expect(2) = 7.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 727 PPPXPPPP 750
PPP PPPP
Sbjct: 280 PPPPPPPP 287
Score = 23.4 bits (48), Expect(2) = 7.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 733 PXPPPPXXXXPXXXPP 780
P PPPP P PP
Sbjct: 301 PPPPPPTDFAPPPPPP 316
>SB_41722| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 343
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -2
Query: 372 LPPGTRVRCP---SIARPPCGWSGYSARAPRSQR 280
+PPGTR R P + ARPP AR PR QR
Sbjct: 214 IPPGTRARSPVDSAKARPPV--DSARARYPRRQR 245
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 727 PPPXPPPP 750
PPP PPPP
Sbjct: 721 PPPAPPPP 728
Score = 23.0 bits (47), Expect(2) = 9.3
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 730 PPXPPPPXXXXPXXXPP 780
PP PPPP PP
Sbjct: 755 PPPPPPPAVPGEGARPP 771
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,522,511
Number of Sequences: 59808
Number of extensions: 442680
Number of successful extensions: 2749
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2239
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2491217872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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