Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N03
(871 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 33 0.25
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 26 1.1
At3g26240.1 68416.m03274 DC1 domain-containing protein contains ... 30 1.7
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 30 1.7
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 30 2.3
At2g02630.1 68415.m00202 DC1 domain-containing protein contains ... 29 3.1
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 29 4.0
At3g50180.1 68416.m05486 hypothetical protein 29 4.0
At3g50130.1 68416.m05480 expressed protein ; expression supporte... 29 4.0
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 29 4.0
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 29 4.0
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 29 4.0
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 4.0
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 4.0
At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family... 29 4.0
At5g05680.1 68418.m00625 nuclear pore complex protein-related co... 29 5.3
At5g17500.1 68418.m02053 glycosyl hydrolase family 5 protein / c... 28 7.1
At5g37850.1 68418.m04557 pfkB-type carbohydrate kinase family pr... 28 9.3
At4g01760.1 68417.m00229 DC1 domain-containing protein similar t... 28 9.3
At2g31920.1 68415.m03899 expressed protein 28 9.3
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PPP PPPP P PP P PP PP
Sbjct: 427 PPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPP 474
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PPP PPP P PP P PP PP
Sbjct: 426 PPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPP 473
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PPP PPPP PP P PP PP
Sbjct: 499 PPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPP 546
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PPP PPPP P PP P P PP
Sbjct: 466 PPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPP 513
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 730 PPXPPPPXXXXPXXXPP 780
PP PPPP P PP
Sbjct: 120 PPPPPPPPPPPPTITPP 136
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 727 PPPXPPPP 750
PPP PPPP
Sbjct: 97 PPPPPPPP 104
>At3g26240.1 68416.m03274 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 922
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -3
Query: 269 EGCDCVLDDDEAHGPRQVRHVHRDQTVPLLF---TDDVAIGCYFCEKRAESERE-YNC 108
E CD L A P+QVR+ H +PL + T D+ C CE + E Y C
Sbjct: 764 EECDYALCFKCATLPQQVRYKHDKHILPLSYGKKTSDMTYWCEACEGKINPEEGFYRC 821
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 730 PPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PP PPPP P PP P PP PP
Sbjct: 376 PPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPP 422
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PPP PPPP P PP PP PP
Sbjct: 384 PPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPP 431
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 379 PPPPPPPPPPPPPPPPPP 396
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 380 PPPPPPPPPPPPPPPPPP 397
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 381 PPPPPPPPPPPPPPPPPP 398
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 382 PPPPPPPPPPPPPPPPPP 399
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 383 PPPPPPPPPPPPPPPPPP 400
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PPP PPPP P PP PP PP
Sbjct: 30 PPPVPPPPPSHQPYSYPPPPPPPPHAYYQQGPHYPQFNQLQAPPPPPP 77
>At2g02630.1 68415.m00202 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 440
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 266 GCDCVLDDDEAHGPRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESEREYNC 108
GCD +L + A PR+ H + L+F +D C C R + Y C
Sbjct: 193 GCDFILHETCADAPRRKVHPLHPHPLKLIFYEDNCFHCKAC-WRTSTAFGYRC 244
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 273 PPPQPPPPPPPKPQPPPP 290
>At3g50180.1 68416.m05486 hypothetical protein
Length = 588
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 25 PPPQPPPPPPPPPPPPPP 42
>At3g50130.1 68416.m05480 expressed protein ; expression supported
by MPSS
Length = 564
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPPXXXXXXXPXXXXXXXXXXXXXXXXPPXXPP 870
PPP PPPP PP P PP PP
Sbjct: 10 PPPPPPPPSFRSIPRPPPPPSFRSIPPRRHFFKKKSKSLPPPPPPLPP 57
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 73 PPPSPPPPSPPPPSPPPP 90
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 78 PPPSPPPPSPPPPSPPPP 95
>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
protein similar to SWISS-PROT:Q15428
Length = 277
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 230 PPPPPPPPHQAQPPPPPP 247
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 42 PPPPPPPPPPPPPPPPPP 59
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 43 PPPPPPPPPPPPPPPPPP 60
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 44 PPPPPPPPPPPPPPPPPP 61
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 45 PPPPPPPPPPPPPPPPPP 62
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 46 PPPPPPPPPPPPPPPPPP 63
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 47 PPPPPPPPPPPPPPPPPP 64
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 85 PPPSPPPPQLPPPPQLPP 102
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 714 PPPPPPPPLSKTPAPPPP 731
Score = 23.4 bits (48), Expect(2) = 7.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 727 PPPXPPPP 750
PPP PPPP
Sbjct: 681 PPPPPPPP 688
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 730 PPXPPPPXXXXPXXXPP 780
P PPPP P PP
Sbjct: 726 PAPPPPPLSKTPVPPPP 742
>At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains,
INTERPRO:IPR000694
Length = 144
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 60 PPPSPPPPSPPPPACPPP 77
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 727 PPPXPPPPXXXXPXXXPP 780
PPP PPPP P PP
Sbjct: 65 PPPSPPPPACPPPPALPP 82
>At5g05680.1 68418.m00625 nuclear pore complex protein-related
contains weak similarity to Nuclear pore complex protein
Nup88 (Nucleoporin Nup88) (88 kDa nuclear pore complex
protein) (Swiss-Prot:Q99567) [Homo sapiens]
Length = 810
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 153 AADCDVVSKKQWDGLIPVHVS 215
+ +C V K WD L+P+HVS
Sbjct: 545 SGECIVAEMKTWDLLLPIHVS 565
>At5g17500.1 68418.m02053 glycosyl hydrolase family 5 protein /
cellulase family protein predicted protein F3F19.15 -
Arabidopsis thaliana, EMBL:AC007357
Length = 526
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/52 (21%), Positives = 22/52 (42%)
Frame = -1
Query: 202 GIKPSHCFLLTTSQSAAISVRSELRASASTTAEWRRAMSRSGACQHVKHAGI 47
G+K + +S+R+ELR T+ +W + M + H + +
Sbjct: 183 GLKKMATIFMNVKNVVGMSLRNELRGYNHTSKDWYKYMQKGAEAVHTSNPNV 234
>At5g37850.1 68418.m04557 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 309
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -3
Query: 314 LDIPHELLAASVRPAEGCDCVLDDD-EAHGPRQVRHVHRDQTVPL 183
L++ ++L + + CD V+ D+ + + P ++ HV+R++ VPL
Sbjct: 106 LEVINKLRSVNPNLTYVCDPVMGDEGKLYVPEELVHVYREKVVPL 150
>At4g01760.1 68417.m00229 DC1 domain-containing protein similar to
T15B16.10 similar to A. thaliana CHP-rich proteins
encoded by T10M13, GenBank accession number AF001308
Length = 667
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -3
Query: 302 HELLAASVRPAEGCDCVLDDDEAHGPRQVRHVHRDQTVPLLFTDDVAIGCYFCEK 138
H + S CD +L + A PR+ HV ++ + L+ ++ GC C K
Sbjct: 411 HPISPQSFYGCMDCDFILHQNCAGFPRRKWHVLHNERLALVTSEVNIFGCSACHK 465
>At2g31920.1 68415.m03899 expressed protein
Length = 585
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 422 VRADVQPAGALVHLAVTSHQERGSDVPVLQGLHVV 318
+R+D G +++ H E+G VPV++GL V
Sbjct: 78 IRSDEIQLGQFIYICGGLHVEKGCPVPVIRGLKPV 112
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,915,097
Number of Sequences: 28952
Number of extensions: 299164
Number of successful extensions: 2892
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2318
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2038669600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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