Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G18
         (453 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    24   0.58 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.2 bits (50), Expect = 0.58
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 279 DPVCDPPCVNGVCKQPNVCQCNANYTDNP 365
           DP   PPC   VC  P+ C C+ + T  P
Sbjct: 156 DPNRAPPCDPAVCVLPD-CFCSEDGTTIP 183


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 115 ISSHIGDHFASWAQFAFINKLNIGMNGSINRNNL 216
           + S IG + A W+      +L++  NG  N  NL
Sbjct: 55  VYSFIGVNDADWSVLVIDPELDVDQNGFRNFTNL 88


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 115 YGTCTSSGTF 86
           YGTC S G F
Sbjct: 557 YGTCRSEGIF 566


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,642
Number of Sequences: 336
Number of extensions: 2866
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)