Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G13
         (556 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10739| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_46986| Best HMM Match : HEAT (HMM E-Value=2.5e-06)                  28   5.9  
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.8  

>SB_10739| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 52

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 265 GAREFSRCQNIRLSSWGPRSC 203
           G R   RC++ R +SWG  SC
Sbjct: 16  GVRHIGRCESSRKASWGKASC 36


>SB_46986| Best HMM Match : HEAT (HMM E-Value=2.5e-06)
          Length = 486

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 195 WELHERGPHELRRIFWQRLNSLAPQSHQVRSLLAALGPELRGWDAQ 332
           WE+   G   +RR+     ++L PQ H   +LL A+GPE +   +Q
Sbjct: 97  WEVKCEGLQCVRRLAKHHPDTLVPQLH---TLLLAVGPEAKNLRSQ 139


>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1184

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 192 AWELHERGPHELRRIFWQRLNSLAPQSHQVRSLLAALGPELRGWD 326
           AW  ++RG   +   FW  L+ +   SHQ R+ L     +L  WD
Sbjct: 392 AWSEYKRGFGHVSGEFWLGLDKINLLSHQTRNRLRV---DLMDWD 433


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,002,751
Number of Sequences: 59808
Number of extensions: 180193
Number of successful extensions: 766
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1288581898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)