Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G04
         (451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   9.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   9.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 445 LLIMRHAESKKCTLQYHI 392
           L+   H  S KC +QYHI
Sbjct: 143 LIYEAHGFSYKCGIQYHI 160


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 445 LLIMRHAESKKCTLQYHI 392
           L+   H  S KC +QYHI
Sbjct: 139 LIYEAHGFSYKCGIQYHI 156


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 70  KAFLHWYTGE 99
           KA L W+TGE
Sbjct: 333 KAHLRWHTGE 342


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 301 KNSRDYSF*LYYQISKILPPRI*P 372
           KNS+ YS     ++  ++PP+I P
Sbjct: 584 KNSQGYSARGSLEVQVMVPPQILP 607


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 366 LTFRLNS*GIWYCKVHFL 419
           L  R N+ G W    HFL
Sbjct: 657 LRLRANNPGFWLFHCHFL 674


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,448
Number of Sequences: 336
Number of extensions: 1274
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)