Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G04
(451 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 124 3e-29
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 124 3e-29
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 124 3e-29
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 117 4e-27
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 117 4e-27
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 77 1e-18
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 79 2e-15
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 62 2e-10
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 62 2e-10
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 61 4e-10
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 61 4e-10
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.005
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 124 bits (299), Expect = 3e-29
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 124 bits (299), Expect = 3e-29
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 314 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 370
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 124 bits (299), Expect = 3e-29
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 369 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 117 bits (282), Expect = 4e-27
Identities = 51/57 (89%), Positives = 56/57 (98%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GN+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 134 GNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQY 190
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 117 bits (282), Expect = 4e-27
Identities = 51/57 (89%), Positives = 56/57 (98%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GN+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 196 GNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQY 252
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 77.0 bits (181), Expect(2) = 1e-18
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 138
NSTAIQE F+R +EQF AMFRR+AFLHWYT EGMD +EFTE + N
Sbjct: 189 NSTAIQEAFRRFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
Score = 32.7 bits (71), Expect(2) = 1e-18
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 118 FTEAESNMNDLVSEYQQY 171
+ A+SN+NDL+SEYQQY
Sbjct: 256 YFSADSNLNDLISEYQQY 273
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 78.6 bits (185), Expect = 2e-15
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
++TAIQELFKRI + MFRR+AFLHWYT EGMD +F EA++++ DL+S YQQ
Sbjct: 275 SNTAIQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 364 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 532 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 317 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 751 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 1160 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 365 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 796 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 345 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 813 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 867
Score = 61.7 bits (143), Expect = 3e-10
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TA+ E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 380 NTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 965 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 305 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 178 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 61.3 bits (142), Expect = 4e-10
Identities = 23/55 (41%), Positives = 40/55 (72%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 178 NTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 61.3 bits (142), Expect = 4e-10
Identities = 23/55 (41%), Positives = 40/55 (72%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 78 NTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 132
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 55.6 bits (128), Expect = 2e-08
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +1
Query: 16 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 297 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 46.0 bits (104), Expect = 1e-05
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +1
Query: 61 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/54 (27%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEY 162
N++ I+ F + ++F +++RKA +H YT +G++ +F + +++ L+ EY
Sbjct: 417 NNSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,077,633
Number of Sequences: 59808
Number of extensions: 139902
Number of successful extensions: 323
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -