Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E12
(545 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43410| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-26) 30 1.4
SB_16415| Best HMM Match : RVT_1 (HMM E-Value=0.00052) 29 2.5
SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 3.3
SB_36658| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_20221| Best HMM Match : RVT_1 (HMM E-Value=0.00045) 29 3.3
SB_12337| Best HMM Match : RVT_1 (HMM E-Value=0.00049) 29 3.3
SB_9404| Best HMM Match : RVT_1 (HMM E-Value=0.00051) 29 3.3
SB_2238| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-08) 29 3.3
SB_59419| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_23879| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 3.3
SB_11094| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_58943| Best HMM Match : rve (HMM E-Value=6.1e-13) 28 4.3
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 5.7
SB_5824| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_43410| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-26)
Length = 541
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 322 FLLHRKLRPILESDRWGSHLRRLTRNSVVXIRCAIIASHHRLIVFK 459
FLL R L E D+ G+ + +LT+N V+ + +++ R++ K
Sbjct: 312 FLLRRLLGVRTEGDKKGAKVSKLTKNEVLMVNIGSLSTGGRVLAVK 357
>SB_16415| Best HMM Match : RVT_1 (HMM E-Value=0.00052)
Length = 316
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P++ DFQ
Sbjct: 81 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCQRMVVCAKKNGKPRRTVDFQ 136
>SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1017
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P++ DFQ
Sbjct: 15 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCHRMVVCAKKNGKPRRTVDFQ 70
>SB_36658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P++ DFQ
Sbjct: 603 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCHRMVVCAKKNGKPRRTVDFQ 658
>SB_20221| Best HMM Match : RVT_1 (HMM E-Value=0.00045)
Length = 955
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P++ DFQ
Sbjct: 299 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCHRMVVCAKKNGKPRRTVDFQ 354
>SB_12337| Best HMM Match : RVT_1 (HMM E-Value=0.00049)
Length = 447
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P++ DFQ
Sbjct: 67 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCHRMVVCAKKNGKPRRTVDFQ 122
>SB_9404| Best HMM Match : RVT_1 (HMM E-Value=0.00051)
Length = 471
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P++ DFQ
Sbjct: 140 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCHRMVVCAKKNGKPRRTVDFQ 195
>SB_2238| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-08)
Length = 271
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 366 VGITLASIDAEFGCTYPLRHNRFTSSAYSFQMIV 467
+G+ L +++ YP+RH T+ AYS + +
Sbjct: 85 LGLQLIALERMCAIVYPIRHRNLTNRAYSLAIAI 118
>SB_59419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P++ DFQ
Sbjct: 27 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCHRMVVCAKKNGKPRRTVDFQ 82
>SB_23879| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1273
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P++ DFQ
Sbjct: 602 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCHRMVVCAKKNGKPRRTVDFQ 657
>SB_11094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P++ DFQ
Sbjct: 299 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCHRMVVCAKKNGKPRRTVDFQ 354
>SB_58943| Best HMM Match : rve (HMM E-Value=6.1e-13)
Length = 1134
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P + DFQ
Sbjct: 227 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCHRMVVCPKKNGKPHRTVDFQ 282
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 229 IPIGVFRQHHMRTNTSRISVLTILDHIMT*PSGEIVVKSTEPITCNRKEKRPQQATDFQ 53
IP+ + Q ++ + L +L+ + P GE V + C +K +P + DFQ
Sbjct: 267 IPVPLHWQEEVKAGLDQDVALGVLEPV---PVGEPVTWCHRMVVCAKKNGKPPRTVDFQ 322
>SB_5824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = +3
Query: 366 VGITLASIDAEFGCTYPLRHNRFTSSAYSFQMIVLRDILFSFQLFSVYLRSHFHLTSDA 542
VG+T+ +I+ + +P RH T + Y + ++ +L Q+ L + +++ A
Sbjct: 98 VGLTIIAIERLYSVQFPQRHRNTTRAVY-YGLVAATWVLAGLQMLLRILHGYSYISFTA 155
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,137,215
Number of Sequences: 59808
Number of extensions: 351612
Number of successful extensions: 760
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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