Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_J10
(283 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74; Bilate... 87 9e-17
UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;... 87 9e-17
UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17; Fungi/... 81 6e-15
UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubular... 72 3e-12
UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillar... 53 1e-06
UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1; Encepha... 38 0.033
UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.043
UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4; T... 38 0.057
UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10; Archa... 36 0.23
UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7; Euryar... 35 0.30
UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 34 0.70
UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia lam... 33 0.93
UniRef50_A6SML3 Cluster: Fatty acid synthase subunit alpha; n=3;... 32 2.1
UniRef50_Q5GAE6 Cluster: Putative uncharacterized protein; n=2; ... 32 2.8
UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:... 32 2.8
UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3; Halobact... 31 3.7
UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiell... 31 6.5
UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeu... 31 6.5
>UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74;
Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens
(Human)
Length = 84
Score = 86.6 bits (205), Expect = 9e-17
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = +3
Query: 3 TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
TTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 44 TTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;
n=100; Eukaryota|Rep: 40S ribosomal protein S27-like
protein - Homo sapiens (Human)
Length = 84
Score = 86.6 bits (205), Expect = 9e-17
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = +3
Query: 3 TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRKQH 125
TTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 44 TTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17;
Fungi/Metazoa group|Rep: 40S ribosomal protein S27 -
Neurospora crassa
Length = 82
Score = 80.6 bits (190), Expect = 6e-15
Identities = 33/39 (84%), Positives = 37/39 (94%)
Frame = +3
Query: 3 TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRK 119
TTVFSHAQ VV+C GC+T+LCQPTGG+ARLTEGCSFRRK
Sbjct: 44 TTVFSHAQTVVICQGCTTVLCQPTGGKARLTEGCSFRRK 82
>UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubularin;
n=2; Apocrita|Rep: PREDICTED: similar to myotubularin -
Nasonia vitripennis
Length = 2064
Score = 71.7 bits (168), Expect = 3e-12
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +3
Query: 6 TVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRRK 119
T+FSHAQR V C GC TILC PTGG+ARLTEGCSFR+K
Sbjct: 2024 TIFSHAQRPVECDGCRTILCTPTGGKARLTEGCSFRKK 2061
>UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillardia
theta|Rep: 40S ribosomal protein S27 - Guillardia theta
(Cryptomonas phi)
Length = 81
Score = 52.8 bits (121), Expect = 1e-06
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +3
Query: 9 VFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRR 116
+FSH+Q +VC C+ LC PTGG+ARL +GC F R
Sbjct: 45 IFSHSQTKIVCKNCALNLCYPTGGKARLIKGCKFSR 80
>UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S27
- Encephalitozoon cuniculi
Length = 85
Score = 38.3 bits (85), Expect = 0.033
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 3 TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFRR 116
T +SH+Q + C GC I+ +GGRA ++ C F++
Sbjct: 42 TCCYSHSQTNISCPGCGDIILTSSGGRAVVSPNCEFKK 79
>UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 217
Score = 37.9 bits (84), Expect = 0.043
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 48 CSTILCQPTGGRARLTEGCSFRRK 119
CS ILC+PTGG+ ++ GC+F+ K
Sbjct: 193 CSAILCKPTGGKVQIQAGCAFKIK 216
>UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S27,
putative - Trichomonas vaginalis G3
Length = 86
Score = 37.5 bits (83), Expect = 0.057
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 3 TTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSFR 113
TT FSH+ V C C T L PTGGR L + R
Sbjct: 45 TTAFSHSNVPVFCKNCQTPLATPTGGRILLADQVEIR 81
>UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10;
Archaea|Rep: 30S ribosomal protein S27e - Pyrobaculum
aerophilum
Length = 67
Score = 35.5 bits (78), Expect = 0.23
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 12 FSHAQRVVVCAGCSTILCQPTGGRARL 92
FSHA VV C C +L PTGG+A+L
Sbjct: 32 FSHAAMVVRCLVCGRVLAIPTGGKAKL 58
>UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Halobacterium salinarium (Halobacterium halobium)
Length = 57
Score = 35.1 bits (77), Expect = 0.30
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 6 TVFSHAQRVVVCAGCSTILCQPTGGRARL 92
TVF A V CA C T L +PTGG A L
Sbjct: 18 TVFGKASTEVACAVCGTTLARPTGGEADL 46
>UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4;
Thermoprotei|Rep: 30S ribosomal protein S27e - Aeropyrum
pernix
Length = 73
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 9 VFSHAQRVVVCAGCSTILCQPTGGRARL 92
VFSH+ C C +L +PTGG+AR+
Sbjct: 37 VFSHSTFRARCLNCGEVLVEPTGGKARI 64
>UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein S27 - Giardia
lamblia ATCC 50803
Length = 81
Score = 33.5 bits (73), Expect = 0.93
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 9 VFSHAQRVVVCAGCSTILCQPTGGRARLT 95
V+SHA V C GC++ + PTGG+ T
Sbjct: 44 VYSHANTPVFCPGCTSQISIPTGGKCAFT 72
>UniRef50_A6SML3 Cluster: Fatty acid synthase subunit alpha; n=3;
Ascomycota|Rep: Fatty acid synthase subunit alpha -
Botryotinia fuckeliana B05.10
Length = 2202
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 31 LLYAQDVPQSFASPLVAELD*RKDVHLEENSIKSWRESRINF 156
L A++ P F SPL+ R+ V L + +IK+W+ES + +
Sbjct: 1399 LTTARENPGKFPSPLLDIKYRRRQVELRKKNIKAWQESELEY 1440
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 31 LLYAQDVPQSFASPLVAELD*RKDVHLEENSIKSWRESRINF 156
L A++ P F SPL+ R+ V L + +IK+W+ES + +
Sbjct: 2036 LTTARENPGKFPSPLLDIKYRRRQVELRKKNIKAWQESELEY 2077
>UniRef50_Q5GAE6 Cluster: Putative uncharacterized protein; n=2;
Singapore grouper iridovirus|Rep: Putative
uncharacterized protein - Grouper iridovirus
Length = 362
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 115 LLNEHPSVNLARPPVGWQRIVEHPAHT--TTLCAWLN 11
LLN P + L +P V W I+ +PA+T T C N
Sbjct: 321 LLNHTPKITLLKPNVDWWEIMNNPAYTCKTNACLAYN 357
>UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:
LRRGT00170 - Rattus norvegicus (Rat)
Length = 496
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 9 VFSHAQRVVVCAGCSTILCQPT 74
+FS VV+ GCST+ CQPT
Sbjct: 233 IFSQEHTVVLYDGCSTVFCQPT 254
>UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3;
Halobacteriaceae|Rep: Ribosomal protein S27.eR -
Haloquadratum walsbyi (strain DSM 16790)
Length = 75
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 9 VFSHAQRVVVCAGCSTILCQPTGGRA 86
+F A VV CA C T L PTGG A
Sbjct: 19 IFGKASTVVNCAVCGTTLATPTGGDA 44
>UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiella
natans|Rep: Ribosomal protein S27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 93
Score = 30.7 bits (66), Expect = 6.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 9 VFSHAQRVVVCAGCSTILCQPTGGR 83
+FSH+ C CST+L +P+GG+
Sbjct: 49 IFSHSVFWKTCVDCSTLLTRPSGGK 73
>UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S27E - Cenarchaeum
symbiosum
Length = 224
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 3 TTVFSHAQRVVVCAGCSTILCQPTGGRARL 92
T V+S A+ V C C +L +P GG+A L
Sbjct: 27 TIVYSMAKSAVNCRFCGNLLAEPAGGKAVL 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,912,938
Number of Sequences: 1657284
Number of extensions: 3905787
Number of successful extensions: 9555
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9555
length of database: 575,637,011
effective HSP length: 71
effective length of database: 457,969,847
effective search space used: 10075336634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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