Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_J03
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   0.88 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   1.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   1.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.2  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   8.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.2  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -2

Query: 417 VSVCNVNFFFLNRYECIHDRERSSVT*RNFWRFLIK 310
           + +CN+   F  RY+ I+++    +  +N   F+I+
Sbjct: 182 ILICNIALAFKQRYQLINEQMAVRINPKNCASFVIE 217


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 338 NATFGDF*LKLFKIDIKTHTKSNKTRLGAQFHG*VLK 228
           N   G+   +L + +   H  SN+  LG  FH   LK
Sbjct: 386 NIQTGEQFARLLRHNFNRHLNSNRAPLGLHFHASWLK 422


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 338 NATFGDF*LKLFKIDIKTHTKSNKTRLGAQFHG*VLK 228
           N   G+   +L + +   H  SN+  LG  FH   LK
Sbjct: 393 NIQTGEQFARLLRHNFNRHLNSNRAPLGLHFHASWLK 429


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 120 CSRSCARVSYNLH 158
           C ++CARV Y+++
Sbjct: 797 CCKNCARVDYSMN 809


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 132 CARVSYNLHCIFFIQNPNFCLEL 200
           CA + +N+H +F +    F L L
Sbjct: 184 CAFIFFNMHLLFLLCLDYFTLHL 206


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 237 LPVKLCTESGFI 272
           LP++ C E+GFI
Sbjct: 50  LPIEGCNETGFI 61


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 237 LPVKLCTESGFI 272
           LP++ C E+GFI
Sbjct: 50  LPIEGCNETGFI 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,032
Number of Sequences: 336
Number of extensions: 3159
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)