Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_P05
(354 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12) 31 0.20
SB_43368| Best HMM Match : 7tm_1 (HMM E-Value=3.2e-37) 31 0.27
SB_23069| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.47
SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 29 0.82
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 29 1.1
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_48695| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 1.9
SB_749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.9
SB_42331| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-07) 28 2.5
SB_22730| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_15403| Best HMM Match : CH (HMM E-Value=0) 28 2.5
SB_49625| Best HMM Match : DPPIV_N (HMM E-Value=6.1) 27 3.3
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 5.8
SB_55475| Best HMM Match : VQ (HMM E-Value=2) 27 5.8
SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) 26 7.7
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 26 7.7
>SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12)
Length = 77
Score = 31.5 bits (68), Expect = 0.20
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 288 SPCCCTLLYAPVCGSVGGPYAH 353
SP CTL Y PVCGS G Y +
Sbjct: 28 SPTLCTLQYDPVCGSDGKTYGN 49
>SB_43368| Best HMM Match : 7tm_1 (HMM E-Value=3.2e-37)
Length = 367
Score = 31.1 bits (67), Expect = 0.27
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +2
Query: 2 FTVSLLELMI--LCQSYLPH*FEFTLVILLIASCAL-ILRVSALSPTVMYLAEQ 154
F +S+L L + L Q++ P + ++L++ CA+ ++ SA+ P V Y+A +
Sbjct: 273 FAISMLPLNVFRLVQAFYPSFVFYKFYLILLSVCAVFVIANSAMEPVVYYIASR 326
>SB_23069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 30.3 bits (65), Expect = 0.47
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -1
Query: 249 SDSRDSRVRLTGEITRGFERSYHQTP---QTVSIDC-SAKYITVGDKADTRSI 103
S R R+ + G++ GF RS+HQ P ++ C S++ +GDK RS+
Sbjct: 45 SSPRMPRIVVEGQLVAGFSRSFHQFPLLRVNANLLCLSSRNWLLGDKQICRSL 97
>SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)
Length = 1724
Score = 29.5 bits (63), Expect = 0.82
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 291 PCCCTLLYAPVCGSVGGPY 347
P CT YAPVCGS G Y
Sbjct: 48 PMACTREYAPVCGSDGKTY 66
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 29.1 bits (62), Expect = 1.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 300 CTLLYAPVCGSVGGPYAH 353
C+L+YAPVCG+ G Y++
Sbjct: 5299 CSLVYAPVCGTDGQEYSN 5316
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 300 CTLLYAPVCGSVGGPY 347
CTL YAPVCG+ G Y
Sbjct: 5228 CTLEYAPVCGTDGQSY 5243
Score = 26.6 bits (56), Expect = 5.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 291 PCCCTLLYAPVCGSVGGPY 347
P CT Y+P+CGS G Y
Sbjct: 5155 PDICTFEYSPLCGSDGKTY 5173
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 291 PCCCTLLYAPVCGSVGGPYAH 353
P C L Y+PVCGS G Y++
Sbjct: 1368 PSICPLHYSPVCGSDGNMYSN 1388
Score = 26.2 bits (55), Expect = 7.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 291 PCCCTLLYAPVCGSVGGPYAH 353
P CT Y PVCG+ G Y +
Sbjct: 1296 PIFCTYEYMPVCGTDGKTYGN 1316
>SB_48695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 4 HRVPTRTHDLVPVLSTTLIRIHSGYPSDRLL 96
H +PT H L +L T LIR+ SD+++
Sbjct: 51 HMIPTTAHPLTQILGTRLIRVMVKQFSDQVI 81
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 291 PCCCTLLYAPVCGSVGGPYAH 353
P CTL Y PVCGS YA+
Sbjct: 197 PKVCTLDYTPVCGSDNKTYAN 217
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 300 CTLLYAPVCGSVGGPY 347
CT YAPVCGS G Y
Sbjct: 46 CTREYAPVCGSDGKTY 61
>SB_749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 249 SDSRDSRVRLTGEITRGFERSYHQTP 172
S R R+ + G++ GF RS+HQ P
Sbjct: 45 SSPRMPRIVVEGQLVAGFSRSFHQFP 70
>SB_42331| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-07)
Length = 403
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 209 ISPVSRTLESRLSDYSVTNTRMTHVGIPLLLYLAV 313
+ P + + SR SV N R + +PL++YL V
Sbjct: 6 VRPATLRIPSRCQYLSVNNQRSPIMSVPLMIYLGV 40
>SB_22730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 288 SPCCCTLLYAPVCGSVGGPYAH 353
SP CT +P+C VG P+ H
Sbjct: 94 SPSSCTSFASPLCTRVGWPHCH 115
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 300 CTLLYAPVCGSVGGPY 347
CT YAPVCGS G Y
Sbjct: 728 CTREYAPVCGSDGNTY 743
>SB_49625| Best HMM Match : DPPIV_N (HMM E-Value=6.1)
Length = 708
Score = 27.5 bits (58), Expect = 3.3
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 52 TLIRIHSGYPSDRLLRSYTPCISFVTDSYVFSGTIY--THRLR 174
TLI++H GY R R + VT V +G Y THRLR
Sbjct: 580 TLIQVHKGYAYPRTHRLRLSKYTQVTLIQVHTGYAYKSTHRLR 622
Score = 26.6 bits (56), Expect = 5.8
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 19 RTHDLVPVLST--TLIRIHSGYPSDRLLRSYTPCISFVTDSYVFSGTIY--THRLR 174
RTH L +T TLI++H+GY R R + + T +G Y THRLR
Sbjct: 84 RTHRLRLSKNTQATLIQVHTGYAYPRTHRLHLSKYTQATLIQEHTGYAYPRTHRLR 139
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 291 PCCCTLLYAPVCGSVGGPY 347
P C TL Y PVCG G Y
Sbjct: 1754 PECRTLKYTPVCGDDGKSY 1772
>SB_55475| Best HMM Match : VQ (HMM E-Value=2)
Length = 489
Score = 26.6 bits (56), Expect = 5.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 16 TRTHDLVPVLSTTLIRIHSGYPSDRLLRSYTPCISFVTDSYVFSGTIY--THRLR 174
T+ H L +LI++H+GY L R + + T V G Y +HRLR
Sbjct: 193 TQRHHLSKNTQASLIQVHTGYAYPSLQRLHLSKYTQATLIEVHIGYAYPRSHRLR 247
>SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19)
Length = 92
Score = 26.2 bits (55), Expect = 7.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 300 CTLLYAPVCGSVGGPYAH 353
CT +Y PVCG+ G Y +
Sbjct: 43 CTKIYRPVCGTDGKTYGN 60
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 223 PDPRIPAI*LLCDKHPHDSCGHPPAAVPCCMPPS 324
P P+ P CD P+ +C P C+ PS
Sbjct: 657 PTPQDPCTGFNCDTPPYSTCKVQDDGKPACVCPS 690
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,258,156
Number of Sequences: 59808
Number of extensions: 260110
Number of successful extensions: 711
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 548040812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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