Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_O23
         (357 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         23   2.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   3.4  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   3.4  

>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 115 ICIF-YKVHLYSAVCFFFSFLCFIYYCYMKPHSKCIVY*Y 231
           +CI    + L S+ C   + L F++ C   P S+ ++Y Y
Sbjct: 41  LCIIALSLTLSSSSCKQSTSLSFVFLCCCVPSSERLIYYY 80


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 351  RKLGPILDLDSWGSNPRRLTWNPAALNTAPTKLVKTPNN 235
            R+ GP      W SN  +++    A + A   ++  PN+
Sbjct: 1652 RRPGPFGSKQKWNSNNNKMSATSMAASAAMHTVLSGPND 1690


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
 Frame = -1

Query: 321 SWGSNPRRLTWNPAA---LNTA---PTKLVKTPNNTILVNNA 214
           SW  N  +LTWNPA+   LN     PT +V  P + +L NNA
Sbjct: 92  SW--NDPKLTWNPASYGNLNVVRWDPT-IVWRP-DVVLYNNA 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,581
Number of Sequences: 2352
Number of extensions: 5995
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)