Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_C01
         (631 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL450024-1|CAH70737.1|  828|Homo sapiens myb-like, SWIRM and MPN...    72   2e-12
AL035411-1|CAI21908.1|  828|Homo sapiens myb-like, SWIRM and MPN...    72   2e-12
AB067502-1|BAB67808.1|  726|Homo sapiens KIAA1915 protein protein.     72   2e-12
BX537912-1|CAD97896.1|  234|Homo sapiens hypothetical protein pr...    39   0.017

>AL450024-1|CAH70737.1|  828|Homo sapiens myb-like, SWIRM and MPN
           domains 1 protein.
          Length = 828

 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
 Frame = +1

Query: 34  LIQCRIYNTEKPAPYEVRLHVSTLIAMDVHAHTSRGEVMGLTGGARA-APRLLTVWAYRP 210
           LI C  ++ EK  P++V++    L+ MD+HAH S  EV+GL GG  +   +++ V A  P
Sbjct: 561 LIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMAEVIGLLGGRYSEVDKVVEVCAAEP 620

Query: 211 AAAAAGSTHCEMDXXXXXXXXXXXXXXXXTVCGWXXXXXXXXXXXXALDLATQRSLQRAL 390
             + +    CEMD                +V GW              D+ TQ   Q   
Sbjct: 621 CNSLSTGLQCEMDPVSQTQASETLAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYF 680

Query: 391 LRSQVPFLGFITSQH 435
            R    F+G I S +
Sbjct: 681 SRGGAKFIGMIVSPY 695


>AL035411-1|CAI21908.1|  828|Homo sapiens myb-like, SWIRM and MPN
           domains 1 protein.
          Length = 828

 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
 Frame = +1

Query: 34  LIQCRIYNTEKPAPYEVRLHVSTLIAMDVHAHTSRGEVMGLTGGARA-APRLLTVWAYRP 210
           LI C  ++ EK  P++V++    L+ MD+HAH S  EV+GL GG  +   +++ V A  P
Sbjct: 561 LIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMAEVIGLLGGRYSEVDKVVEVCAAEP 620

Query: 211 AAAAAGSTHCEMDXXXXXXXXXXXXXXXXTVCGWXXXXXXXXXXXXALDLATQRSLQRAL 390
             + +    CEMD                +V GW              D+ TQ   Q   
Sbjct: 621 CNSLSTGLQCEMDPVSQTQASETLAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYF 680

Query: 391 LRSQVPFLGFITSQH 435
            R    F+G I S +
Sbjct: 681 SRGGAKFIGMIVSPY 695


>AB067502-1|BAB67808.1|  726|Homo sapiens KIAA1915 protein protein.
          Length = 726

 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
 Frame = +1

Query: 34  LIQCRIYNTEKPAPYEVRLHVSTLIAMDVHAHTSRGEVMGLTGGARA-APRLLTVWAYRP 210
           LI C  ++ EK  P++V++    L+ MD+HAH S  EV+GL GG  +   +++ V A  P
Sbjct: 459 LIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMAEVIGLLGGRYSEVDKVVEVCAAEP 518

Query: 211 AAAAAGSTHCEMDXXXXXXXXXXXXXXXXTVCGWXXXXXXXXXXXXALDLATQRSLQRAL 390
             + +    CEMD                +V GW              D+ TQ   Q   
Sbjct: 519 CNSLSTGLQCEMDPVSQTQASETLAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYF 578

Query: 391 LRSQVPFLGFITSQH 435
            R    F+G I S +
Sbjct: 579 SRGGAKFIGMIVSPY 593


>BX537912-1|CAD97896.1|  234|Homo sapiens hypothetical protein
           protein.
          Length = 234

 Score = 38.7 bits (86), Expect = 0.017
 Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 1/99 (1%)
 Frame = +1

Query: 142 EVMGLTGGARA-APRLLTVWAYRPAAAAAGSTHCEMDXXXXXXXXXXXXXXXXTVCGWXX 318
           EV+GL GG  +   +++ V A  P  + +    CEMD                +V GW  
Sbjct: 3   EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPVSQTQASETLAVRGFSVIGWYH 62

Query: 319 XXXXXXXXXXALDLATQRSLQRALLRSQVPFLGFITSQH 435
                       D+ TQ   Q    R    F+G I S +
Sbjct: 63  SHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPY 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,713,500
Number of Sequences: 237096
Number of extensions: 1164981
Number of successful extensions: 12136
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12128
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)