Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_F03
         (491 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   3.1  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   4.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.4  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 1   LEQNSSPSDIATELPVEEA*LITLLVVL 84
           L+Q   P DIA     E+  L+TL V L
Sbjct: 163 LKQVKIPHDIAVNTTTEKGALVTLSVQL 190


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 137 WLLGVYLCDVAMFV 96
           W+LGV LC +  +V
Sbjct: 107 WVLGVSLCKIRAYV 120


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 178 FSESHLISGQHSGYGFLGSISV 113
           +S+SHLIS ++  +    ++SV
Sbjct: 345 YSQSHLISNENRDFQTTPTVSV 366


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 68  VINHASSTGNSVAMSDGLEF 9
           V+N  + +GN++A  D L F
Sbjct: 408 VLNRLTLSGNAIASIDPLAF 427


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,047
Number of Sequences: 438
Number of extensions: 2441
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)