Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M23
         (503 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    25   0.59 
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   4.2  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   5.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.3  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 268 TDILDHRWFQGHTQFGLRPRS 330
           ++I  H+WF G    GLR R+
Sbjct: 618 SEIQKHKWFDGFNWEGLRART 638


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 425 LENQLASHPRCGPHHLNG 372
           ++  L  H  CG H+L+G
Sbjct: 319 IQKHLKIHDTCGVHNLHG 336


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/36 (27%), Positives = 13/36 (36%)
 Frame = -1

Query: 491 HHLWLAAPGHLRKPSIYQVSHQLENQLASHPRCGPH 384
           HH   A P H     +   S+    Q+   P   PH
Sbjct: 433 HHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHHHPH 468


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -1

Query: 416 QLASHPRCGPHHL 378
           ++++HP+ GPH +
Sbjct: 353 EVSTHPQAGPHFI 365


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -1

Query: 416 QLASHPRCGPHHL 378
           ++++HP+ GPH +
Sbjct: 353 EVSTHPQAGPHFI 365


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +2

Query: 119 YYTEASKNNKKCIENLIDI 175
           YY E++K ++  +++LID+
Sbjct: 393 YYFESNKIDETTLKHLIDV 411


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +2

Query: 119 YYTEASKNNKKCIENLIDI 175
           YY E++K ++  +++LID+
Sbjct: 393 YYFESNKIDETTLKHLIDV 411


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,722
Number of Sequences: 438
Number of extensions: 3101
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)