Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_M06
(680 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 226 1e-59
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 172 3e-43
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 155 4e-38
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 131 6e-31
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 122 3e-28
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 9e-22
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 99 4e-21
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 92 3e-19
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 81 8e-16
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 76 2e-14
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 45 7e-05
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 34 0.093
SB_22312| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_18394| Best HMM Match : TFIID-31kDa (HMM E-Value=0) 29 3.5
SB_47411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_40957| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.0
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 226 bits (553), Expect = 1e-59
Identities = 112/206 (54%), Positives = 135/206 (65%)
Frame = +1
Query: 61 KLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLD 240
+LFINNE+VD S K FPTINP I ++EG F S WR +D
Sbjct: 331 ELFINNEFVDCTSGKVFPTINPTTGEKICDISEGDKEDVDKAVKAAKEAFKLGSAWRTMD 390
Query: 241 ASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILG 420
AS RG LL+KLA L++RD YLA LET+D+GK + ++ ++ RYYAG ADK+ G
Sbjct: 391 ASMRGKLLYKLAQLIDRDIAYLASLETIDSGKLFSDSVGDMQSSANCFRYYAGWADKVTG 450
Query: 421 NTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKPAEQTPLTA 600
TIPADG +T EPVG+ G I PWN+P+ M KIAPALA G V++KPAEQTPLTA
Sbjct: 451 KTIPADGPYFVYTRHEPVGLVGAITPWNFPLNMASVKIAPALACGNVVILKPAEQTPLTA 510
Query: 601 LAMAALVKEAGVPAGVVHVIPGYGPT 678
L ALVKEAG PAGVV+VIPGYGPT
Sbjct: 511 LYFCALVKEAGFPAGVVNVIPGYGPT 536
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 172 bits (418), Expect = 3e-43
Identities = 83/138 (60%), Positives = 99/138 (71%)
Frame = +1
Query: 220 SEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAG 399
S WR +DAS RG L+KLA L ERDA YLA LE+ D GK + +A+ +V G RYYAG
Sbjct: 1254 SVWRTMDASARGHFLYKLADLCERDADYLARLESYDGGKVINEAKIDVQGMIGCFRYYAG 1313
Query: 400 KADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKPA 579
ADK+ G TIPADG T+T EPVGV G I PWN+P+ M K+APALA GC V++KPA
Sbjct: 1314 WADKVTGKTIPADGPFFTYTRHEPVGVVGAITPWNFPLLMEGLKLAPALACGCVVILKPA 1373
Query: 580 EQTPLTALAMAALVKEAG 633
EQTPLTAL +A+LVKE G
Sbjct: 1374 EQTPLTALYLASLVKEVG 1391
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 155 bits (375), Expect = 4e-38
Identities = 85/214 (39%), Positives = 117/214 (54%), Gaps = 7/214 (3%)
Frame = +1
Query: 52 KYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWR 231
K+ + I ++W DA +T +NP VI +V F S W
Sbjct: 42 KHHQCLIGDQWCDAADGQTIQVLNPATAEVIARVPRAGQREIDRAVMAARQAFDD-SPWS 100
Query: 232 LLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYYAGKAD 408
+ +R LL+ A L+E++A LAE+E++DNGK AE ++ A +RY AG A
Sbjct: 101 RIKPVERQKLLWNFADLIEKNAALLAEIESIDNGKSAVIAEHVDIRLAVDFLRYMAGFAT 160
Query: 409 KILGNTIPA------DGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVV 570
KI G T+ D + +T +E VGV G I+ WN+P+ + WK+ PALA GCT V+
Sbjct: 161 KIEGRTVQVSVPFMPDAQFHGYTRREAVGVVGAIVAWNFPLLLACWKLGPALATGCTTVL 220
Query: 571 KPAEQTPLTALAMAALVKEAGVPAGVVHVIPGYG 672
KPAE TPLTAL +A L EAG PAGVV+V+ G G
Sbjct: 221 KPAEDTPLTALKLAELALEAGYPAGVVNVVTGLG 254
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 131 bits (316), Expect = 6e-31
Identities = 63/154 (40%), Positives = 94/154 (61%)
Frame = +1
Query: 217 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYA 396
+ W +L S+RG +L + L+ + + +A++E DNGKP +A +V + ++ YYA
Sbjct: 326 FKTWSVLSGSERGRILGDASRLVRKRREDIAKVEVHDNGKPFHEALWDVDNVADVLEYYA 385
Query: 397 GKADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKP 576
G A + G + +T +EP+GV G I WNYPI WKIAPA+A G T+V KP
Sbjct: 386 GVAPTLSGQHVQLPNGSFAYTRREPLGVVGGIGAWNYPIQTACWKIAPAIACGNTIVYKP 445
Query: 577 AEQTPLTALAMAALVKEAGVPAGVVHVIPGYGPT 678
+ TP+ A+A+A ++ EAGVP GVV++I G G T
Sbjct: 446 SPLTPMNAVALADILTEAGVPPGVVNIIQGGGET 479
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 122 bits (294), Expect = 3e-28
Identities = 57/144 (39%), Positives = 97/144 (67%), Gaps = 2/144 (1%)
Frame = +1
Query: 241 ASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILG 420
A +R ++L K L+ + +A++ TL++GKP+ +A EVL+A+ + +++ +A ++ G
Sbjct: 4 AKERSIILRKWYDLILENIDDIAKIITLESGKPLLEARGEVLYAANYIEFFSEEAKRVYG 63
Query: 421 NTIPAD--GEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKPAEQTPL 594
+ IP++ G+ + T KEPVGVC I PWN+PI M + K + A+A GCT++ +P+ QTPL
Sbjct: 64 DIIPSNNPGQKVLIT-KEPVGVCASITPWNFPIAMLVRKASSAIACGCTMIARPSGQTPL 122
Query: 595 TALAMAALVKEAGVPAGVVHVIPG 666
+ALA+ L +A +P GV ++I G
Sbjct: 123 SALALGELALKAEIPDGVFNIIVG 146
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 100 bits (240), Expect = 9e-22
Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 1/153 (0%)
Frame = +1
Query: 217 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYY 393
+ W L R L+ +A +++ A+ +A LE++DNGK V++ ++ + + ++
Sbjct: 692 FQSWSKLPGHARARHLYSIARHVQKHARLIAVLESMDNGKSVRETRDCDIPNVARHLYHH 751
Query: 394 AGKADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVK 573
AG A + D E+ + +PVGV G I+PWN+P+ + WK+ PALA G TVV+K
Sbjct: 752 AGWAQLM-------DTEMQGW---KPVGVVGGIVPWNFPLMLLCWKVCPALAMGNTVVLK 801
Query: 574 PAEQTPLTALAMAALVKEAGVPAGVVHVIPGYG 672
PA T L+AL A + EAG+P GV +V+ G G
Sbjct: 802 PATYTRLSALLFAEICAEAGLPPGVFNVVTGNG 834
Score = 57.2 bits (132), Expect = 1e-08
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Frame = +1
Query: 112 PTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLDASQRGLLLFKLATLME- 288
P +NP E VI QVA+G S W A R +++ LA +E
Sbjct: 1166 PILNPSGE-VIAQVADGNRKDIREAVEAAHKAA---SGWGKRAAHNRAQIVYYLAENLEM 1221
Query: 289 RDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILGN--------TIPADGE 444
R A+ A + + G+ + + + EV + + YY ADK GN T P +
Sbjct: 1222 RRAEVAARISDM-TGQSLDECKAEVDASIQRLFYYGAYADKFGGNRPVFSDKDTKPEETP 1280
Query: 445 VLTFTLK--EPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKPAEQTPLTALAM 609
T+K EPVGV G P + F+ +APA+ G TVV+ P+E+ P+ A M
Sbjct: 1281 FYGATIKIHEPVGVIGIACPDECSLLAFVSLLAPAIIRGNTVVIVPSEKYPVVAADM 1337
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 98.7 bits (235), Expect = 4e-21
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 5/157 (3%)
Frame = +1
Query: 217 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQ-EVLWASGIVRYY 393
+ W + + R L KLA L+E + A+ E+ D GK V A ++ +R +
Sbjct: 59 FKSWSVSSPAYRAERLRKLADLIEDRLEEFAQAESRDQGKTVNFARNVDIPRCCLNLRMF 118
Query: 394 AGKADKILGNTIPAD----GEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCT 561
A ++G+ A+ V+ ++L+ P GV G I PWN P+ + +KIAPA+A+GCT
Sbjct: 119 ASAI--MVGSNSRANFLESQAVVNYSLRSPKGVAGLISPWNLPLYLLSFKIAPAVASGCT 176
Query: 562 VVVKPAEQTPLTALAMAALVKEAGVPAGVVHVIPGYG 672
VV KP+E T +TA MA L+ +AG P GV++++ G G
Sbjct: 177 VVCKPSEMTSVTAWMMAELINDAGFPPGVINIVFGTG 213
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 92.3 bits (219), Expect = 3e-19
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 1/203 (0%)
Frame = +1
Query: 67 FINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLDAS 246
+I EWV+ +K + I+P D S ++ R EW+
Sbjct: 9 YIAGEWVEG-NKGSVANISPADISDVIGHYAQADKAQTEAAIAAAAAGQR--EWQKSGLE 65
Query: 247 QRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILGNT 426
QR +L + + L + + GK + + E + YYA + + +G T
Sbjct: 66 QRYSVLMAIGDELIARKDELGAILAREEGKTLAEGVGETYRSGQFFHYYAAEVLRQMGET 125
Query: 427 IPADGEVLTF-TLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKPAEQTPLTAL 603
+ + T +EPVGV G I PWN+P WKIAPALA G +V KPA Q P +A
Sbjct: 126 AESVRPGIEIETRREPVGVVGIITPWNFPTATGAWKIAPALAFGNAIVWKPANQVPASAW 185
Query: 604 AMAALVKEAGVPAGVVHVIPGYG 672
A+ ++ +PAG +++ G G
Sbjct: 186 ALTEIISRQNLPAGTFNLVMGPG 208
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 81.0 bits (191), Expect = 8e-16
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Frame = +1
Query: 280 LMERDAKYLAELETLDNGKPVKQAEQEVLWASGI--VRYYAGKADKILGNTIPADGEVLT 453
L+E+ ++ ++ ETLD G + +A +A+ + +R A I+G + A+G L
Sbjct: 87 LLEKRSEDFSKAETLDTGTVISRANNNKEFANEVLNIRVLVDHALSIMGEST-AEGGTLC 145
Query: 454 FTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKPAEQTPLTALAMAALVKEAG 633
++++ +GV I W+ +P + + PA+A+G VV+KP+ PLT +A ++K++G
Sbjct: 146 YSIRHSLGVVAIITSWSQALPSILRHLVPAMASGNCVVIKPSCLAPLTVHLLAKVLKDSG 205
Query: 634 VPAGVVHVIPGYG 672
+P GVV+++ G G
Sbjct: 206 IPKGVVNIVYGRG 218
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +1
Query: 499 WNYPIPMFIWKIAPALAAGCTVVVKPAEQTPLTALAMAALVKEAGVPAGVVHVIP 663
WN+P+ M K A ALAAGCTV++KP+E+TP ALA+ L +EAG PAGV++ IP
Sbjct: 149 WNFPLGMITRKAAAALAAGCTVIIKPSEETPFCALALQQLAEEAGFPAGVINTIP 203
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +1
Query: 313 LETLDNGKPVKQA-EQEVLWASGIVRYYAGKADKILGNTIP---ADGEVLT 453
LETLDNGKP + ++ + RYYAG ADKI G TIP DGE +T
Sbjct: 33 LETLDNGKPYNDSFNVDLEFTIKCYRYYAGWADKIHGKTIPLGKVDGEQMT 83
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +1
Query: 466 EPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKPAEQTPLTALAMAALV 621
EP+GV I WNYP+ + + A+A G V+KP+E TA +A LV
Sbjct: 71 EPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSEVASATAQLVADLV 122
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 61 KLFINNEWVDAVSKKTFPTINPQDESVIVQVA 156
+LFIN E+VD+ KTF TINP D +V+ QV+
Sbjct: 710 QLFINGEFVDSHHGKTFNTINPTDGTVLAQVS 741
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +1
Query: 568 VKPAEQTPLTALAMAALVKEAGVPAGVVHVIPGYG 672
V A+ TP+TAL A L AG P GV++++PG G
Sbjct: 752 VDAAKVTPMTALKFAELAARAGFPKGVINILPGSG 786
>SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 35.9 bits (79), Expect = 0.030
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +1
Query: 247 QRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILGNT 426
+RG ++ ++ + L +L +L+ GK + E+ + Y G + G
Sbjct: 73 KRGEVVRQIGHALREKLTPLGKLLSLEVGKIFPEGVGEIQEYIDVCDYAVGLSRMFDGKV 132
Query: 427 IPAD--GEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAG 555
P++ G L PVG G I +N+P+ +F W A ++ G
Sbjct: 133 FPSERPGHAL-LEQWNPVGTVGVITAFNFPVAVFGWNTAISMTCG 176
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 34.3 bits (75), Expect = 0.093
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 538 PALAAGCTVVVKPAEQTPLTALAMAALVKEAGVPAGVVHVIPGYGPT 678
PAL G V+ KPA L+ + + +EAG+P GV++ +P G T
Sbjct: 200 PALM-GNVVLWKPASTAILSQYRVMEMFQEAGLPDGVINFVPSSGST 245
>SB_22312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 628 AGVPAGVVHVIPGYGPT 678
AG P GVV+++PG+GPT
Sbjct: 1 AGFPEGVVNIVPGFGPT 17
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 534 CSSFGCRLHSCC*ACRANTTHSACYGRACQGSWCPSRSC 650
C + C C C N T AC ++C+ S CP C
Sbjct: 322 CQAISCGGDRCTQECGKNCTSMACTAKSCELS-CPGGGC 359
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 549 CRLHSCC*ACRANTTHSACYGRACQGSWCPSRSC 650
C+ SC C A T S+C +C C +C
Sbjct: 183 CKTGSCSFNCAAQTCESSCAHGSCPNMTCGGTNC 216
>SB_18394| Best HMM Match : TFIID-31kDa (HMM E-Value=0)
Length = 326
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 574 PAEQTPLTALAMAALVKEAGV 636
PA TP AL MAA++KE G+
Sbjct: 22 PARSTPKDALVMAAILKEMGI 42
>SB_47411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 425
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 210 PSLLRMASPGCFTKRPTALQTGH-PHGERRKIFSRTRNTGQRKTSEASRTRSLVG 371
PSL++ S TK+ T +T H E + F+R G R+ + ++T+ L G
Sbjct: 303 PSLMQRPSKKTQTKKGTGDETEDCRHAETMRDFTREYGRGVRQANVRAKTKELTG 357
>SB_40957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 648 NSCWDTSFLDKRGHSKRCEWCLLCRLNNNCATCSQSWSN 532
NSC TS L +R + WC + N + T S SW N
Sbjct: 245 NSCDPTSLLRERSPAYLRTWCTVSSCNCSTRTLS-SWGN 282
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 465 GTRRCLRPNLTMELPNPDVHMENCSSFGCRLHSCC*ACRANTTHSACYGRACQGSWCP-S 641
G ++C TM NPD+ + N G R C + + Q S CP S
Sbjct: 1583 GNQKCCSDGCTMICTNPDLDIVNAPVRGRRKPGICPVMSVSKAPCPTTNQCSQDSDCPGS 1642
Query: 642 RSC 650
+ C
Sbjct: 1643 QKC 1645
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 235 LDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVL 366
LDA G++ F+LA E + ++E D G P ++ V+
Sbjct: 2253 LDAGVNGVVKFRLAEQTELGGNRVVKVEAYDQGSPSLSSQVSVI 2296
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,946,644
Number of Sequences: 59808
Number of extensions: 455163
Number of successful extensions: 1531
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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