Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M03
         (537 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38781| Best HMM Match : Astacin (HMM E-Value=9.4e-22)               29   1.8  
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   1.8  
SB_15513| Best HMM Match : Astacin (HMM E-Value=1.3e-08)               29   1.8  
SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_4597| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   4.2  
SB_38780| Best HMM Match : Astacin (HMM E-Value=0)                     27   9.7  

>SB_38781| Best HMM Match : Astacin (HMM E-Value=9.4e-22)
          Length = 328

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 378 WKTIPQYGKYSLGNRYGTIMAYVIYIFSNN 467
           W  + +   Y L   YG++M Y  Y FSNN
Sbjct: 250 WNNMNEQIPYKLPYDYGSVMHYEAYAFSNN 279


>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3297

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 382 FQPLCSLRPITSRPSNAA*RGICAGRHDG 296
           F  +C  +PITSRP+N+    +C G   G
Sbjct: 337 FDEVCIFKPITSRPANSERYLVCKGLRRG 365


>SB_15513| Best HMM Match : Astacin (HMM E-Value=1.3e-08)
          Length = 161

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 378 WKTIPQYGKYSLGNRYGTIMAYVIYIFSNN 467
           W  + +   Y L   YG++M Y  Y FSNN
Sbjct: 121 WNNMNEQIPYKLPYDYGSVMHYEAYAFSNN 150


>SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1455

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = -1

Query: 282  IASLLTVLGIHWSIFYIDMLILRVLDDFSIQYCVLTS 172
            I ++ T+  + ++ ++ID+L   +++     YCVLT+
Sbjct: 1363 ILTIATIWDLSFAFYFIDVLKFELIEYRDFSYCVLTA 1399


>SB_4597| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 144

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 22/82 (26%), Positives = 36/82 (43%)
 Frame = +2

Query: 146 KSHLTSEDIEVKTQYCIEKSSKTRNINMSM*NIDQWIPRTVKRLAIHRRSSVMPACTDTS 325
           KS   S+D+E + +Y I   SK+  +   +  +     +   R ++   +S     T  +
Sbjct: 41  KSVQWSDDLE-EVRYYIPHRSKSETLKRKIKKVRMKAEKLTDR-SLRAFASFSEVPTMNA 98

Query: 326 SRCIGRT*CYRTEGTQRLEDYS 391
            RC+GR       G Q  EDYS
Sbjct: 99  LRCMGRQAVSMDTGFQSFEDYS 120


>SB_38780| Best HMM Match : Astacin (HMM E-Value=0)
          Length = 1153

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +3

Query: 408 SLGNRY--GTIMAYVIYIFSNNRE 473
           SLG  Y  G++M Y  Y FS NRE
Sbjct: 889 SLGTEYDYGSVMHYEAYAFSKNRE 912


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,929,538
Number of Sequences: 59808
Number of extensions: 320649
Number of successful extensions: 596
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)