Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_M02
(531 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 158 2e-39
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 158 2e-39
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 155 1e-38
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 155 1e-38
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 155 1e-38
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 151 2e-37
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 87 5e-18
At1g31820.1 68414.m03908 amino acid permease family protein weak... 31 0.64
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 29 1.5
At3g52860.1 68416.m05825 expressed protein 29 2.0
At5g45310.1 68418.m05562 expressed protein 28 3.4
At3g54690.1 68416.m06051 sugar isomerase (SIS) domain-containing... 28 4.5
At5g37420.1 68418.m04502 hypothetical protein contains Pfam PF04... 27 6.0
At5g02160.1 68418.m00137 expressed protein 27 7.9
At3g09120.1 68416.m01073 hypothetical protein contains Pfam prof... 27 7.9
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 27 7.9
>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)
Length = 247
Score = 158 bits (383), Expect = 2e-39
Identities = 76/140 (54%), Positives = 97/140 (69%)
Frame = +1
Query: 40 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIKERDEIRLAR 219
VPESV + + S++ RK IFKRAEQY KEY K+ + IRL R
Sbjct: 13 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLKR 72
Query: 220 QARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 399
+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKATVNML
Sbjct: 73 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNML 132
Query: 400 RIAEPYIAWGYPNLKSVREL 459
R EPY+ +GYPNLKSV+EL
Sbjct: 133 RRVEPYVTYGYPNLKSVKEL 152
Score = 34.3 bits (75), Expect = 0.052
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 407 LSPILHGATPT*RVSESWVYKRGFAKLNGKRVPITSNSLIE 529
+ P + P + + +YKRG+ KLN +R+ +T NS+++
Sbjct: 135 VEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVD 175
>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)
Length = 242
Score = 158 bits (383), Expect = 2e-39
Identities = 76/140 (54%), Positives = 97/140 (69%)
Frame = +1
Query: 40 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIKERDEIRLAR 219
VPESV + + S++ RK IFKRAEQY KEY K+ + IRL R
Sbjct: 8 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLKR 67
Query: 220 QARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 399
+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKATVNML
Sbjct: 68 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNML 127
Query: 400 RIAEPYIAWGYPNLKSVREL 459
R EPY+ +GYPNLKSV+EL
Sbjct: 128 RRVEPYVTYGYPNLKSVKEL 147
Score = 34.3 bits (75), Expect = 0.052
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 407 LSPILHGATPT*RVSESWVYKRGFAKLNGKRVPITSNSLIE 529
+ P + P + + +YKRG+ KLN +R+ +T NS+++
Sbjct: 130 VEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVD 170
>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 155 bits (377), Expect = 1e-38
Identities = 75/147 (51%), Positives = 101/147 (68%)
Frame = +1
Query: 19 DSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIKER 198
+++ VPESV Q + + +KRK IF RA+QY KEY+ KER
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKER 62
Query: 199 DEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLN 378
+ I+L R+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++N
Sbjct: 63 ELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVN 122
Query: 379 KATVNMLRIAEPYIAWGYPNLKSVREL 459
KAT+NMLR EPY+ +GYPNLKSV+EL
Sbjct: 123 KATINMLRRVEPYVTYGYPNLKSVKEL 149
Score = 34.3 bits (75), Expect = 0.052
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 407 LSPILHGATPT*RVSESWVYKRGFAKLNGKRVPITSNSLIE 529
+ P + P + + +YKRGF KLN +R +T NS+++
Sbjct: 132 VEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVD 172
>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 155 bits (377), Expect = 1e-38
Identities = 75/147 (51%), Positives = 101/147 (68%)
Frame = +1
Query: 19 DSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIKER 198
+++ VPESV Q + + +KRK IF RA+QY KEY+ KER
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKER 62
Query: 199 DEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLN 378
+ I+L R+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++N
Sbjct: 63 ELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVN 122
Query: 379 KATVNMLRIAEPYIAWGYPNLKSVREL 459
KAT+NMLR EPY+ +GYPNLKSV+EL
Sbjct: 123 KATINMLRRVEPYVTYGYPNLKSVKEL 149
Score = 34.3 bits (75), Expect = 0.052
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 407 LSPILHGATPT*RVSESWVYKRGFAKLNGKRVPITSNSLIE 529
+ P + P + + +YKRGF KLN +R +T NS+++
Sbjct: 132 VEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVD 172
>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 155 bits (377), Expect = 1e-38
Identities = 75/147 (51%), Positives = 101/147 (68%)
Frame = +1
Query: 19 DSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIKER 198
+++ VPESV Q + + +KRK IF RA+QY KEY+ KER
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKER 62
Query: 199 DEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLN 378
+ I+L R+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++N
Sbjct: 63 ELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVN 122
Query: 379 KATVNMLRIAEPYIAWGYPNLKSVREL 459
KAT+NMLR EPY+ +GYPNLKSV+EL
Sbjct: 123 KATINMLRRVEPYVTYGYPNLKSVKEL 149
Score = 34.3 bits (75), Expect = 0.052
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 407 LSPILHGATPT*RVSESWVYKRGFAKLNGKRVPITSNSLIE 529
+ P + P + + +YKRGF KLN +R +T NS+++
Sbjct: 132 VEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVD 172
>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
Length = 242
Score = 151 bits (367), Expect = 2e-37
Identities = 74/140 (52%), Positives = 96/140 (68%)
Frame = +1
Query: 40 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIKERDEIRLAR 219
VPESV Q + + + RK IFKRAEQY KEY KE++ I L R
Sbjct: 8 VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKR 67
Query: 220 QARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 399
+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKAT+NML
Sbjct: 68 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNML 127
Query: 400 RIAEPYIAWGYPNLKSVREL 459
R EPY+ +G+PNLKSV+EL
Sbjct: 128 RRVEPYVTYGFPNLKSVKEL 147
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 407 LSPILHGATPT*RVSESWVYKRGFAKLNGKRVPITSNSLIE 529
+ P + P + + +YKRG+ KLN +R+ +T NS++E
Sbjct: 130 VEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVE 170
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 87.4 bits (207), Expect = 5e-18
Identities = 46/149 (30%), Positives = 77/149 (51%)
Frame = +1
Query: 13 KEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIK 192
+E++K L +PE V + S KK+ KR E +V E+R K
Sbjct: 3 EEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVHEFRAK 62
Query: 193 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVR 372
E D IR+ ++ + + P ++ L F+IRI+G N + PK +++L +L+ + GVF +
Sbjct: 63 EVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAK 122
Query: 373 LNKATVNMLRIAEPYIAWGYPNLKSVREL 459
+ L +PY+ +GYPN KSV++L
Sbjct: 123 ATDSLFQKLLKVQPYVTYGYPNDKSVKDL 151
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 401 VSLSPILHGATPT*RVSESWVYKRGFAKLNGKRVPITSNSLIE 529
+ + P + P + + +YK+G + G VP+T N++IE
Sbjct: 132 LKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIE 174
>At1g31820.1 68414.m03908 amino acid permease family protein weak
similarity to asc-type amino acid transporter 2 [Mus
musculus] GI:18148438; contains Pfam profile PF00324:
Amino acid permease
Length = 482
Score = 30.7 bits (66), Expect = 0.64
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -1
Query: 198 TLLDAVFFDILFGSLKDFFPLLNGSGT-PLECDLKT 94
TL A+ + ++F +L +F PLL+G+G PL+ +L T
Sbjct: 245 TLPKALCYGVIFVALSNFLPLLSGTGAIPLDRELWT 280
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 308 GDTWLTPRIRMTNASLASPGT 246
G TW+ P I +N S+ SPGT
Sbjct: 138 GGTWIQPEIEESNKSMFSPGT 158
>At3g52860.1 68416.m05825 expressed protein
Length = 156
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 109 LKRRSASIKKRKEIFKRAEQYVKEYRIKERDEI 207
LK + IKK +F+ +++ VKE K RDE+
Sbjct: 121 LKTKDELIKKHMRLFQESQKLVKEQIEKHRDEL 153
>At5g45310.1 68418.m05562 expressed protein
Length = 352
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 139 RKEIFKRAEQYVKEYRIKERD 201
RKEI K + +KEYRI E+D
Sbjct: 107 RKEIEKNLREAIKEYRIMEQD 127
>At3g54690.1 68416.m06051 sugar isomerase (SIS) domain-containing
protein / CBS domain-containing protein similar to
SP|Q47334 Polysialic acid capsule expression protein
kpsF {Escherichia coli}; contains Pfam profiles PF01380:
sugar isomerase (SIS) domain, PF00571: CBS domain
Length = 350
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 261 SFTGHIIIATVTSLSCQSDFITLLDAVFFDILFGSLKDFFPLLNGSGTPLE 109
+F + + T+ SLS +S F++ LDA+ DI S +D + SG E
Sbjct: 80 AFVANKVSQTLVSLSFRSSFLSPLDALHGDIGALSPRDVLVFFSKSGATEE 130
>At5g37420.1 68418.m04502 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 579
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 142 KEIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRK 321
KEI ++ + V E IK +D + R+ +RG Y V++I Q+ + R+
Sbjct: 295 KEIVRKIKMLVTEPEIKPQDGFKYRREEFDRGWYDCLKSLSSLEVLKIFAFTQLEDRSRE 354
Query: 322 V 324
+
Sbjct: 355 I 355
>At5g02160.1 68418.m00137 expressed protein
Length = 87
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = -3
Query: 478 ETAFVHPT--LGHSSSWGSP 425
+T FV T L HSSSWGSP
Sbjct: 8 QTTFVSSTNFLKHSSSWGSP 27
>At3g09120.1 68416.m01073 hypothetical protein contains Pfam profile
PF05056: Protein of unknown function (DUF674)
Length = 333
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 231 VTSLSCQSDFITLLDAVFFDILFGSLKDFFPLLNGSGTPLECDLK 97
V +SC+S FI D ++ S+ + +LNG G P DLK
Sbjct: 137 VVFVSCRSSFILTDD---LKVMLNSIDEIVKVLNGLGYPNINDLK 178
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 112 KRRSASIKKRKEIFKRAEQYVK----EYRIKERDEI-RLARQARNR 234
KRR +KR+E KR E+ K E + KER+E+ R R+ + R
Sbjct: 556 KRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQER 601
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,720,794
Number of Sequences: 28952
Number of extensions: 224323
Number of successful extensions: 592
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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