Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_L11
(635 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_316| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 31 0.59
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4) 29 3.2
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 29 3.2
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 29 3.2
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.5
SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34) 28 5.5
SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37) 28 5.5
SB_48772| Best HMM Match : rve (HMM E-Value=4.2e-35) 28 5.5
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 28 5.5
SB_39098| Best HMM Match : EGF (HMM E-Value=5.2e-07) 28 5.5
SB_36737| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 5.5
SB_28729| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 5.5
SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_14178| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 5.5
SB_13901| Best HMM Match : rve (HMM E-Value=5.5e-29) 28 5.5
SB_13442| Best HMM Match : rve (HMM E-Value=2.3e-13) 28 5.5
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_42915| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 5.5
SB_39602| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 5.5
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_30319| Best HMM Match : rve (HMM E-Value=1.2e-37) 28 5.5
SB_19168| Best HMM Match : rve (HMM E-Value=3.9e-38) 28 5.5
SB_17252| Best HMM Match : Integrase_Zn (HMM E-Value=0.96) 28 5.5
SB_14976| Best HMM Match : rve (HMM E-Value=1.3e-38) 28 5.5
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 28 5.5
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_10281| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 5.5
SB_3392| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 5.5
SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 7.3
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_12923| Best HMM Match : zf-C3HC4 (HMM E-Value=1.1) 28 7.3
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_57589| Best HMM Match : DSBA (HMM E-Value=0.0042) 28 7.3
SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11) 28 7.3
SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24) 28 7.3
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 28 7.3
SB_15380| Best HMM Match : RA (HMM E-Value=0.11) 28 7.3
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 7.3
SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_51570| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_41384| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_40554| Best HMM Match : Integrase_Zn (HMM E-Value=0.79) 27 9.7
SB_18761| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3) 27 9.7
SB_55822| Best HMM Match : BNR (HMM E-Value=5.8) 27 9.7
SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26) 27 9.7
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 27 9.7
SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 27 9.7
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = +2
Query: 71 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNG 250
MAD + +A P E T T E+ K+P+ EV E G+E +
Sbjct: 35 MADEEGKATEATPPEATETPAAEAAPAKAPSADAEVQEEAGEETASATQADEATTEAQPQ 94
Query: 251 DAEESNDAT 277
+ N AT
Sbjct: 95 EGAAENPAT 103
>SB_316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -3
Query: 579 QIINLRKRSIRNSLRTYRYNGFWDDMCKCI---WVWSVD 472
Q+I ++IRNS + Y N WDD K + W W +D
Sbjct: 26 QVIPYLHQTIRNSSKIYERNIVWDDPTKWVIMRWPWQLD 64
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +2
Query: 89 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 268
E+Q EE T E +++ ++ +K E E +G+E + +++ESN
Sbjct: 89 EEQTEEEEEQTEEEEEQTEEEEEEEEKEEGKEEDGEEEVVTDERGISSSKDESNESDESN 148
Query: 269 DATENGDVTE 298
++ E+ + E
Sbjct: 149 ESDESNESDE 158
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +2
Query: 101 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATE 280
A P + T+ E K +K S K + ES E+G +G++ ES ++ E
Sbjct: 872 AQPAKETANE-KAGMVKNSKASKEDSNESG--ESGESGKSGESGESGESGESGESGESGE 928
Query: 281 NGDVTEVKETG 313
+G+ E E+G
Sbjct: 929 SGESGESGESG 939
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 86 VEKQDAAPEEVTSTEVKESPIKKSP-TKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 262
++K D+ + + KE+ +K+ K ++ + + E+G +G++ E
Sbjct: 860 LDKTDSGKVAMFAQPAKETANEKAGMVKNSKASKEDSNESGESGESGKSGESGESGESGE 919
Query: 263 SNDATENGDVTEVKETG 313
S ++ E+G+ E E+G
Sbjct: 920 SGESGESGESGESGESG 936
>SB_41532| Best HMM Match : Extensin_2 (HMM E-Value=1.4)
Length = 1633
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 116 VTSTEVKESPIKKSPTKK 169
VT T VKESP+K SPT K
Sbjct: 849 VTDTPVKESPVKFSPTGK 866
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/73 (20%), Positives = 34/73 (46%)
Frame = +2
Query: 110 EEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGD 289
EE T E +++ ++ +K E E +G+E + +++ESN++ E+ +
Sbjct: 41 EEQTEEEEEQTEEEEEEEEKEEGKEEDGEEEVVTDERGISSSKDESDESDESNESDESNE 100
Query: 290 VTEVKETGVKRKS 328
+ E+ +S
Sbjct: 101 SDKSNESDESNES 113
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 192 PLLSGTSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 70
P+ +FL DFL SL S +TSS + S F + +S++
Sbjct: 304 PISEQQGIFLPSDFLTSSSLPSDFLTSSSSLSDFLSLSSSL 344
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -3
Query: 165 LVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 70
L+ DFL S SV +TSS + S F T++S++
Sbjct: 553 LLSDFLTSSSSLSVFLTSSSSLSVFLTSSSSL 584
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -3
Query: 165 LVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 70
L+ DFL S SV +TSS + S F T++S++
Sbjct: 798 LLSDFLTSSSSLSVFLTSSSSLSVFLTSSSSL 829
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 177 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAAS 76
TS L DFL SL S +TSS + S F T++S
Sbjct: 599 TSSSLPSDFLTSSSLPSDFLTSSSSLSVFPTSSS 632
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 177 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAAS 76
TS L DFL SL S +TSS + S F T++S
Sbjct: 864 TSSSLPSDFLTSSSLPSDFLTSSSSLSVFPTSSS 897
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 177 TSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAAS 76
TS L DFL SL S +TSS + S F T++S
Sbjct: 1194 TSSSLPSDFLTSSSLPSDFLTSSSSLSVFPTSSS 1227
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 189 LLSGTSVFLVGDFLIGDSLTSVEVTSSGAASCFSTAASAI 70
L S +S L+ DFL S S +TSS + S F T++S++
Sbjct: 990 LTSSSSRGLLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSL 1029
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 2236 PEPVRSTELPEKPWEDLATDLTEIPGGN 2263
>SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34)
Length = 863
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 532 PEPVRSTELPEEPWEDLATDLTEIPGGN 559
>SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 488 PEPVRSTELPEEPWEDLATDLTEIPGGN 515
>SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37)
Length = 971
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 699 PEPVRSTELPEEPWEDLATDLTEIPGGN 726
>SB_48772| Best HMM Match : rve (HMM E-Value=4.2e-35)
Length = 494
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 251 PEPVRSTELPEEPWEDLATDLTEIPGGN 278
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 1059 PEPVRSTELPEEPWEDLATDLTEIPGGN 1086
>SB_39098| Best HMM Match : EGF (HMM E-Value=5.2e-07)
Length = 577
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 536 PEPVRSTELPEEPWEDLATDLTEIPGGN 563
>SB_36737| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 358
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 24 PEPVRSTELPEEPWEDLATDLTEIPGGN 51
>SB_28729| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 374
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 40 PEPVRSTELPEEPWEDLATDLTEIPGGN 67
>SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1551
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 1249 PEPVRSTELPEKPWEDLATDLTEIPGGN 1276
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 801 PEPVRSTELPEEPWEDLATDLTEIPGGN 828
>SB_14178| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 283
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 40 PEPVRSTELPEEPWEDLATDLTEIPGGN 67
>SB_13901| Best HMM Match : rve (HMM E-Value=5.5e-29)
Length = 202
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 40 PEPVRSTELPEEPWEDLATDLTEIPGGN 67
>SB_13442| Best HMM Match : rve (HMM E-Value=2.3e-13)
Length = 271
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 154 PEPVRSTELPEEPWEDLATDLTEIPGGN 181
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.3 bits (60), Expect = 5.5
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Frame = +2
Query: 74 ADAAVEKQDAAPE--EVTSTEVKESPIKKSPTKK-TEVPESNGK----ENGTXXXXXXXX 232
A+ + D A E E TE +ES +K S +KK T + S G+ ++GT
Sbjct: 60 AEKLTDPPDKAGESSEEERTESQESNVKSSDSKKDTNIASSKGEAPEDKSGTMSGIMDSL 119
Query: 233 XXXXNGDAEESNDATENG---DVTEVKE 307
E +D +NG DVT K+
Sbjct: 120 SNLFKVPVGEEDDGDDNGAEEDVTNEKQ 147
>SB_42915| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 610
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 276 PEPVRSTELPEEPWEDLATDLTEIPGGN 303
>SB_39602| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 523
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 292 PEPVRSTELPEEPWEDLATDLTEIPGGN 319
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +2
Query: 92 KQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESND 271
K APE S E E+P + T PE+ + T + +
Sbjct: 4444 KTTMAPETTVSPETTEAPGTTVAPETTMAPETTIPQETTIAPESTEAPETTMAPETTATE 4503
Query: 272 ATENGDVTEVKETGV 316
+TE + T V ET V
Sbjct: 4504 STETPETTIVPETTV 4518
>SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 433 PEPVRSTELPEEPWEDLATDLTEIPGGN 460
>SB_30319| Best HMM Match : rve (HMM E-Value=1.2e-37)
Length = 255
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 40 PEPVRSTELPEEPWEDLATDLTEIPGGN 67
>SB_19168| Best HMM Match : rve (HMM E-Value=3.9e-38)
Length = 586
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 116 PEPVRSTELPEEPWEDLATDLTEIPGGN 143
>SB_17252| Best HMM Match : Integrase_Zn (HMM E-Value=0.96)
Length = 391
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 350 PEPVRSTELPEEPWEDLATDLTEIPGGN 377
>SB_14976| Best HMM Match : rve (HMM E-Value=1.3e-38)
Length = 1172
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 929 PEPVRSTELPEEPWEDLATDLTEIPGGN 956
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 407 QLVGFPPPLSPSFRELSSLSPPPQ 336
QL+ PP LSP R+L L+PPP+
Sbjct: 494 QLLATPPQLSPKHRQL--LAPPPR 515
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 565 PEPVRSTELPEEPWEDLATDLTEIPGGN 592
>SB_10281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 166 PEPVRSTELPEEPWEDLATDLTEIPGGN 193
>SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 899
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 565 PEPVRSTELPEEPWEDLATDLTEIPGGN 592
>SB_3392| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 374
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 40 PEPVRSTELPEEPWEDLATDLTEIPGGN 67
>SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 27.9 bits (59), Expect = 7.3
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = +2
Query: 80 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAE 259
A + ++ P +VT EV SP +KS T+ P+S K DAE
Sbjct: 456 AKKKAKEQCPNDVT--EVSVSPAEKSDTEPITKPKSTSK-----------MTKDQTKDAE 502
Query: 260 ESNDATENGDVTEVKETGVKRK 325
+ DA DV E K K K
Sbjct: 503 KQYDAKAKNDVVEKKPKAHKAK 524
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 101 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 208
+APE +TE +P PT+ T PE+ G + T
Sbjct: 380 SAPESTAATESTVAPETTVPTEITAAPETTGAPDTT 415
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 83 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 208
A+ K AAPE + TE P + K T PE+ K + T
Sbjct: 2392 ALPKTTAAPETTSPTETTAVPGTTAAPKTTASPETTAKPDTT 2433
>SB_12923| Best HMM Match : zf-C3HC4 (HMM E-Value=1.1)
Length = 166
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 316 EEEIHCR*GGGDREDNSRKEGESGGG 393
+E++H GGG + NS +G SG G
Sbjct: 4 DEKVHLMNGGGSTKGNSLSDGGSGDG 29
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 83 AVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 208
A+ K AAPE + TE P + K T PE+ K + T
Sbjct: 2935 ALPKTTAAPETTSPTETTAVPGTTAAPKTTASPETTAKPDTT 2976
>SB_57589| Best HMM Match : DSBA (HMM E-Value=0.0042)
Length = 300
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +1
Query: 340 GGGD--REDNSRKEGESGGGNPTS*SGRSDRLKLRNL 444
GGGD DN EGE GGG +G D K NL
Sbjct: 161 GGGDDGNSDNYNGEGEDGGGGGGDRNGDYDNDKDDNL 197
>SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11)
Length = 1171
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 472 VDRPHPYTFAHIIPKTIITIRSQRIADRSLP*VNNLYL 585
V++PH + A +IP + ++S ++ LP V + YL
Sbjct: 596 VEKPHIWLIADMIPSVSMPVQSSQVVLGFLPQVTDSYL 633
>SB_40271| Best HMM Match : TPR_2 (HMM E-Value=4.6e-24)
Length = 1329
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 149 KKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAE 259
K SP KKT+ E+N + T NGD++
Sbjct: 162 KSSPVKKTKTEETNNETEVTQESTNASVNSNDNGDSQ 198
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 92 KQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENG 205
KQ+++ E+ +S E +E P KK+ K + P +G
Sbjct: 239 KQESSSEDDSSNEEEEKPKKKADVKGKKTPAKQESSSG 276
>SB_15380| Best HMM Match : RA (HMM E-Value=0.11)
Length = 2124
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 440 LRSFKRSLLPLQLVGFPPPLSPSFRELSSLSPPP 339
L SF+ +L L+ PPP + E+ +SPPP
Sbjct: 1391 LDSFEATLHAEWLIPSPPPATEELWEIKVVSPPP 1424
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 101 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 208
+APE +TE +P PT+ T PE+ G + T
Sbjct: 2076 SAPESTAATESTVAPETTVPTEITAAPETTGAPDTT 2111
>SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +2
Query: 113 EVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDV 292
E+ S EVK+ KK+ +K+ +++G + T GD E N A +
Sbjct: 121 EIASKEVKKDKKKKNYSKEKGSSDNSGSGDKTTKPEKNDAKKKDKGDKPEKNYAKKKDKG 180
Query: 293 TEVKETGVKRKS 328
+ ++ K+K+
Sbjct: 181 DKPEKNYAKKKN 192
>SB_51570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1950
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 410 LQLVGFPPPLSPSFRELSSLSPPPQRQW 327
LQ PPP P LS SPP QW
Sbjct: 417 LQTYRIPPPPKPKGGRLSQRSPPFYGQW 444
>SB_41384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 402 QLKRKKRPLKTTQPYYLARFSAMRRPTTPIYICTYHPKNHYNDTFAKNCG 551
+++ + P KTTQ + R P P Y +Y +NH N ++ G
Sbjct: 22 EIESDEEPKKTTQNGQKHEVATPRSPNLPTYSRSYLNQNHRNSRDIRDNG 71
>SB_40554| Best HMM Match : Integrase_Zn (HMM E-Value=0.79)
Length = 207
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 107 PEEVTSTEVKESPIKKSPTKKTEVPESN 190
PE V STE+ E P + T TE+P N
Sbjct: 166 PEPVRSTELPEEPWEDLATDLTELPGGN 193
>SB_18761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = -1
Query: 461 EPSEVVRLRSFKRSLLPLQLVGFPPPLSPSFRE----LSSLSPPPQRQ 330
EP E V + PL V FPPPL E ++PPP Q
Sbjct: 80 EPEEEVTNTELTIEVPPLACVPFPPPLDEGMTEEVWRAYIMTPPPSPQ 127
>SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3)
Length = 376
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 101 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 199
A PEE + EV ES P K TEVPE E
Sbjct: 150 AGPEETPTKEVLESA---EPVKGTEVPEEGDVE 179
>SB_55822| Best HMM Match : BNR (HMM E-Value=5.8)
Length = 440
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 410 LQLVGFPPPLSPSFRELSSLSPPPQRQW 327
LQ PPP P LS SPP QW
Sbjct: 276 LQTYRIPPPPKPKGGRLSQRSPPFYGQW 303
>SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26)
Length = 245
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 413 PLQLVGFPPP-LSPSFRELSSLSPPPQ 336
P Q G PPP + P+F + SPPP+
Sbjct: 182 PFQYPGTPPPPMYPAFPPIFPSSPPPE 208
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 101 AAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 199
A PEE + EV ES P K TEVPE E
Sbjct: 2362 AGPEETPTKEVLESA---EPVKGTEVPEEGDVE 2391
>SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 413 PLQLVGFPPP-LSPSFRELSSLSPPPQ 336
P Q G PPP + P+F + SPPP+
Sbjct: 182 PFQYPGTPPPPMYPAFPPIFPSSPPPE 208
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1
Query: 413 PLQLVGFPPPLSPSFRELSSLSPPPQRQ 330
P Q G PPP R+ S PPPQRQ
Sbjct: 856 PPQYYGGPPPQQQQQRQPQS-GPPPQRQ 882
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,077,265
Number of Sequences: 59808
Number of extensions: 304791
Number of successful extensions: 1432
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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