Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_L09
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45618| Best HMM Match : Ribosomal_L27e (HMM E-Value=0) 190 6e-49
SB_16717| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_21429| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_45708| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_18645| Best HMM Match : RVT_1 (HMM E-Value=0.0003) 31 0.43
SB_17913| Best HMM Match : RVP (HMM E-Value=1.1) 31 0.43
SB_7810| Best HMM Match : RVT_1 (HMM E-Value=2.8026e-45) 31 0.43
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 30 1.3
SB_57324| Best HMM Match : ig (HMM E-Value=1e-26) 29 1.7
SB_35383| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 4.0
SB_56455| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_29343| Best HMM Match : PPI_Ypi1 (HMM E-Value=0.91) 28 5.3
SB_5450| Best HMM Match : eRF1_1 (HMM E-Value=2.6) 28 5.3
SB_16188| Best HMM Match : KOW (HMM E-Value=5.7e-16) 27 6.9
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 27 9.2
SB_6589| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-36) 27 9.2
SB_53970| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_25249| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_45618| Best HMM Match : Ribosomal_L27e (HMM E-Value=0)
Length = 168
Score = 190 bits (463), Expect = 6e-49
Identities = 90/134 (67%), Positives = 105/134 (78%), Gaps = 2/134 (1%)
Frame = +2
Query: 17 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 196
MGK +K GKVVLVL GRYAG+KA+++KNYD+G+SDKPYGHA VAG+ RYP KV KRMGK
Sbjct: 1 MGKFIKSGKVVLVLRGRYAGKKALIIKNYDDGSSDKPYGHALVAGVARYPLKVTKRMGKK 60
Query: 197 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK-FSAKDL-KDPAKRKKLRFNTRVRFEE 370
+ KRSK+KPFVK NYNHLMPTRYSVD +K KD+ +DPA +KK + EE
Sbjct: 61 RTAKRSKVKPFVKVFNYNHLMPTRYSVDVPLDKQVVNKDVFRDPALKKKALREVKSTLEE 120
Query: 371 RYKSGKNKWFFQKL 412
RYKSGKNKWFFQKL
Sbjct: 121 RYKSGKNKWFFQKL 134
>SB_16717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 735
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -3
Query: 184 PFMNLARVSVDAGDESMSVWFVRCALVVILYDNGFTACVPAAEDQHHFSRFH 29
P++ V V +E V+ CAL++++ DN + VPA + FH
Sbjct: 265 PYIGYIEVEVSFPEEETGVYLEECALLLVVPDNDYNKRVPAVIGTNIAKAFH 316
>SB_21429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 184 PFMNLARVSVDAGDESMSVWFVRCALVVILYDNGFTACVPAAEDQHHFSRFH 29
P++ V V +E V CAL++++ DN + VPA + FH
Sbjct: 389 PYIGYIEVEVSFPEEETGVHLEECALLLVVPDNDYNKRVPAVIGTNIAKAFH 440
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 184 PFMNLARVSVDAGDESMSVWFVRCALVVILYDNGFTACVPAAEDQHHFSRFH 29
P++ V V +E V CAL++++ DN + VPA + FH
Sbjct: 109 PYIGYIEVEVSFPEEETGVHLEECALLLVVPDNDYNKRVPAVIGTNIAKAFH 160
>SB_45708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1510
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 184 PFMNLARVSVDAGDESMSVWFVRCALVVILYDNGFTACVPAAEDQHHFSRFH 29
P++ V V +E V CAL++++ DN + VPA + FH
Sbjct: 342 PYIGYIEVEVSFPEEETGVHLEECALLLVVPDNDYNKRVPAVIGTNIAKAFH 393
>SB_18645| Best HMM Match : RVT_1 (HMM E-Value=0.0003)
Length = 1205
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 184 PFMNLARVSVDAGDESMSVWFVRCALVVILYDNGFTACVPAAEDQHHFSRFH 29
P++ V V +E V CAL++++ DN + VPA + FH
Sbjct: 216 PYIGYIEVEVSFPEEETGVHLEECALLLVVPDNDYNKRVPAVIGTNIAKAFH 267
>SB_17913| Best HMM Match : RVP (HMM E-Value=1.1)
Length = 458
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 184 PFMNLARVSVDAGDESMSVWFVRCALVVILYDNGFTACVPAAEDQHHFSRFH 29
P++ V V +E V CAL++++ DN + VPA + FH
Sbjct: 303 PYIGYIEVEVSFPEEETGVHLEECALLLVVPDNDYNKRVPAVIGTNIAKAFH 354
>SB_7810| Best HMM Match : RVT_1 (HMM E-Value=2.8026e-45)
Length = 732
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 184 PFMNLARVSVDAGDESMSVWFVRCALVVILYDNGFTACVPAAEDQHHFSRFH 29
P++ V V +E V CAL++++ DN + VPA + FH
Sbjct: 255 PYIGYIEVEVSFPEEETGVHLEECALLLVVPDNDYNKRVPAVIGTNIAKAFH 306
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 29.9 bits (64), Expect = 1.3
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Frame = +2
Query: 95 KNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYS 274
K +EG + K A R + GKNK H++ + K +G N NH R
Sbjct: 217 KTPEEGKNRKHQKKARTKNTRRGQEQKTPEEGKNKNHQKQEQKTPEEGKNKNHQKRARIE 276
Query: 275 VDFS----------FEKFSAKDLKDPAKRKKLRF-NTRVRFEERY-KSGKNK 394
E+ + ++ K+ +KK R NTR R E++ K GKNK
Sbjct: 277 TPEEGKKKKNTRRRLEQKTPEEGKNRKPQKKARTKNTRKRQEQKTPKEGKNK 328
Score = 29.1 bits (62), Expect = 2.3
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Frame = +2
Query: 77 RKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH----------KRSKIKP 226
R+ + K +EG + KP A + + + GKNK H +R + KP
Sbjct: 288 RRRLEQKTPEEGKNRKPQKKARTKNTRKRQEQKTPKEGKNKNHQKRARTENTRRRLEQKP 347
Query: 227 FVKGVNYNHLMPTRY-SVDFSFEKFSAKDLKDPAKRKKLRF-NTRVRFEER-YKSGKNK 394
+G N NH R + E+ + ++ K+ +K+ R NTR R +++ + GKNK
Sbjct: 348 PEEGKNRNHQKRARIKNTRRRQEQKTPEEGKNRKHQKRARTKNTRRRHQQKPPEEGKNK 406
>SB_57324| Best HMM Match : ig (HMM E-Value=1e-26)
Length = 947
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 215 KIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNK 394
K+K V GVN + L YSV FS+ K + P + +K RF + R K+ + K
Sbjct: 427 KLKCLVTGVN-DPLFNRTYSVWFSYRNGKTKIVGKPRRGEKSRFRSMNGHHLRIKNARVK 485
>SB_35383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 302 AKDL--KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 418
+KDL + P +K FN + E R++ G K F+++LRF
Sbjct: 2 SKDLLGERPMYARKDAFNAYLTMERRFEKGDIKTFWRELRF 42
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 152 IDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMP-TRYSVDFSFEKFSAKDLKDPAK 328
I Y KVH K + + ++K+ PF K N ++P + V +FEK++A + +K
Sbjct: 1083 IKMYMEKVHYYKAKVETYYKTKVMPFYK----NKVVPFYKNKVIPAFEKYTAL-ADELSK 1137
Query: 329 RKKLRFNTRVRFEERYK 379
LR T + YK
Sbjct: 1138 NMTLRAKTYILNSRPYK 1154
>SB_56455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 104 DEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYN 250
D+ D Y + AG+ + + HK+ G K + KP +K VN N
Sbjct: 198 DDDIDDDEYHPGYSAGLKKRLKAAHKQRGYTKAFAKRGTKP-MKEVNSN 245
>SB_29343| Best HMM Match : PPI_Ypi1 (HMM E-Value=0.91)
Length = 383
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +2
Query: 290 EKFSAKDLKDPAKRKKLRFNTRVRFE---ERYKSGKNKWFFQKLR 415
++ S D +D +KRK++RF FE + YK+ FQK R
Sbjct: 237 DETSGNDTEDESKRKRVRFAEGTNFENERQTYKTRVKNITFQKDR 281
>SB_5450| Best HMM Match : eRF1_1 (HMM E-Value=2.6)
Length = 322
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 163 VSVDAGDESMSVWFVRCALVVILYDNGFTACVPAAEDQHHFSRFH 29
V V +E V CAL++++ DN + VPA + FH
Sbjct: 5 VEVSFPEEETGVHLEECALLLVVPDNDYNKRVPAVIGTNIAKAFH 49
>SB_16188| Best HMM Match : KOW (HMM E-Value=5.7e-16)
Length = 105
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 EYPS-KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYD 106
++P+ ++GK K G V V+ GRY G ++V+ D
Sbjct: 58 DFPAHELGKHFKMGDHVKVIGGRYEGDTGLIVRVED 93
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 299 SAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLR 415
SAK+L++ +RK+ +NT E RY+ K K Q R
Sbjct: 562 SAKELEEELERKREDYNTAAD-ERRYQMAKKKDTLQATR 599
>SB_6589| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-36)
Length = 651
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +1
Query: 199 NSQAVENQAFRKRCKLQSSNANPLFCRLQL*KIQCKGPKRPS*AQEAAFQHKGPFRRE 372
+ QA F K N L C ++ K C G K P AQ +++ + G E
Sbjct: 302 SEQAQRYNTFGKTSHPSGYNTGLLHCGIEDGKEYCDGGKHPDRAQGSSYLYHGAMETE 359
>SB_53970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 241 YTFYERLDFRPLVNFIFSHPFMNLARVSVDAGDESMSVWFVRC 113
Y YERL+ L+N+I + + + R D S+ + RC
Sbjct: 100 YQVYERLELNQLINYILALGYQDFQRTL----DNHRSIRYTRC 138
>SB_25249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 147 PASTDTRARFIKGWEKIKFTSGRKSSLS*KV*TTI 251
P T + R IK W K+ +G LS K TTI
Sbjct: 30 PLRTKAKCRAIKLWLKLSNNNGNNEKLSRKAFTTI 64
>SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 131 GHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKD 310
GH F++ ID++ RK HK +KI R+ IK ++Y+ + T+ +D ++ A
Sbjct: 99 GHRFLSLIDKHFRKDHK---LSKIFNRNTIK-----ISYSCMSNTKQIIDSHSKRIIASS 150
Query: 311 L 313
+
Sbjct: 151 I 151
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,125,211
Number of Sequences: 59808
Number of extensions: 313651
Number of successful extensions: 773
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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