Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_L03
(585 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 67 9e-12
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 60 1e-09
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 58 3e-09
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 56 2e-08
At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy... 41 7e-04
At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative / L-id... 29 2.3
At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative / L-id... 29 2.3
At5g36870.1 68418.m04417 glycosyl transferase family 48 protein ... 29 2.3
At3g30640.1 68416.m03878 Ulp1 protease family protein contains P... 29 2.3
At1g69523.1 68414.m07991 UbiE/COQ5 methyltransferase family prot... 29 2.3
At3g02960.1 68416.m00291 copper-binding protein-related low simi... 28 5.3
At3g08660.1 68416.m01006 phototropic-responsive protein, putativ... 27 7.0
At1g11650.2 68414.m01337 RNA-binding protein 45 (RBP45), putativ... 27 7.0
At1g11650.1 68414.m01336 RNA-binding protein 45 (RBP45), putativ... 27 7.0
At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 27 9.2
At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 27 9.2
At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 27 9.2
At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 27 9.2
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 66.9 bits (156), Expect = 9e-12
Identities = 37/103 (35%), Positives = 57/103 (55%)
Frame = +2
Query: 263 CKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLM 442
C+ +++ QI E + S Y AM A+F RD I G AK F +++ EEREHA KL++Y
Sbjct: 97 CEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNK 156
Query: 443 RGELISDVSDLITVENFEPVYFNSGADALEAALNMESFVTKSI 571
RG + S ++ + FE V +E AL++E V + +
Sbjct: 157 RGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKL 199
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 60.1 bits (139), Expect = 1e-09
Identities = 33/102 (32%), Positives = 53/102 (51%)
Frame = +2
Query: 266 KDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMR 445
+ +++ QI E + S Y A+ A+F RD + GFAK F D++ EER HA ++Y R
Sbjct: 90 ESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKR 149
Query: 446 GELISDVSDLITVENFEPVYFNSGADALEAALNMESFVTKSI 571
G + S L+ V F+ A+E AL++E + +
Sbjct: 150 GGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKL 191
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 58.4 bits (135), Expect = 3e-09
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Frame = +2
Query: 251 MHNP-CKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLI 427
+++P C+ +++ QI E + S Y A+ A+F RD + G AK F +++ EEREHA L+
Sbjct: 90 LYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLM 149
Query: 428 DYLLMRGELISDVSDLITVENFEPVYFNSGADALEAALNMESFVTKSI 571
+Y RG + ++ F+ A+E AL++E V + +
Sbjct: 150 EYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKL 197
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 55.6 bits (128), Expect = 2e-08
Identities = 31/102 (30%), Positives = 50/102 (49%)
Frame = +2
Query: 275 MHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMRGEL 454
++ QI E + S Y +M A+F RD + G AK F +++ EER HA K ++Y RG
Sbjct: 98 INEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGR 157
Query: 455 ISDVSDLITVENFEPVYFNSGADALEAALNMESFVTKSIRGV 580
+ + + FE A+E AL++E + + V
Sbjct: 158 VKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNV 199
>At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85
hypothetical protein F9F8.14 - Arabidopsis thaliana,
EMBL:AC009991
Length = 355
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 287 IQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 433
I E + S Y A+ A+ RD + GF K F D++ EER +A K ++Y
Sbjct: 297 IDVEYNVSYVYHALDAYIERDNVGLKGFTKFFNDSSLEERGYAEKFMEY 345
>At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +2
Query: 170 GTLAVSTPAIAIQCHVNPANVSSEWVTMHNPCKDSMHAQIQTEVDASVQYLAMGA 334
G+LA A C P NVS E M P +HA + EV L MGA
Sbjct: 136 GSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVGPETNVLVMGA 190
>At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +2
Query: 170 GTLAVSTPAIAIQCHVNPANVSSEWVTMHNPCKDSMHAQIQTEVDASVQYLAMGA 334
G+LA A C P NVS E M P +HA + EV L MGA
Sbjct: 136 GSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVGPETNVLVMGA 190
>At5g36870.1 68418.m04417 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1862
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 358 IDHVTGEMGTHCQILYGRVHLSLYLRVHAVFTRIVHC 248
+D+ +GT Q+L+ + +SL+L A+F ++ C
Sbjct: 1720 LDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTC 1756
>At3g30640.1 68416.m03878 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 661
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 493 EVFDGDKIADVRNKLSPHEQVVDQLHRMLPLFASRVEEQLR 371
E DG+++AD + L +Q+V + +R+LP EE +R
Sbjct: 385 EKADGERVADDDSILDVTDQIVSEYNRLLPESDEDEEETMR 425
>At1g69523.1 68414.m07991 UbiE/COQ5 methyltransferase family protein
low similarity to SP|Q05197 Phosphatidylethanolamine
N-methyltransferase (EC 2.1.1.17) [Rhodopseudomonas
sphaeroides] {Rhodobacter sphaeroides}; contains Pfam
profile PF01209: methlytransferase, UbiE/COQ5 family
Length = 300
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 353 INRPGFAKLFFDAASEEREHAMKLIDYLL-MRGELISDVSDLI--TVENFEPVYFNSGAD 523
I RPG +F + + E ++L+ +L ++++D L T E+ FN GAD
Sbjct: 219 ILRPGGIYIFIEHVAAEDGTFLRLVQTVLDPLQQVVADGCHLTRHTGESILEARFNGGAD 278
Query: 524 ALEAALNMESFVTKSIRGV 580
+ +L+ ++++ + GV
Sbjct: 279 VKKTSLSRLAYISSHVYGV 297
>At3g02960.1 68416.m00291 copper-binding protein-related low
similarity to copper homeostasis factor gi:3168840 from
Arabidopsis thaliana; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 246
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -3
Query: 484 DGDKIADVRNKLSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDHVTGEMGTHCQILYGR 305
+GD D +K + +++V +++ AS+V LR ++H+ E+G + ++ G+
Sbjct: 21 NGDSSVDKSDKKNQCKEIVLKVYMHCEGCASQVSHCLRGYDGVEHIKTEIGDNKVVVSGK 80
Query: 304 VH--LSLYLRVHAVFTR 260
L + RV F+R
Sbjct: 81 FDDPLKILRRVQKKFSR 97
>At3g08660.1 68416.m01006 phototropic-responsive protein, putative
contains similarity to root phototropism RPT2
[Arabidopsis thaliana] gi|6959488|gb|AAF33112, a signal
transducer of phototropic response PMID:10662859
Length = 582
Score = 27.5 bits (58), Expect = 7.0
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 472 IADVRNKLSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDHVTGEMGTHCQIL-YGRVHL 296
I V+N+ S ++ VD +HR+L F R+EE+ E TG+ H +L GR+ +
Sbjct: 317 IPSVQNEDSMYD--VDTVHRILTFFLERIEEEDDECGYDSDSTGQ---HSSLLKVGRI-M 370
Query: 295 SLYL 284
YL
Sbjct: 371 DAYL 374
>At1g11650.2 68414.m01337 RNA-binding protein 45 (RBP45), putative
similar to gb|U90212 DNA binding protein ACBF from
Nicotiana tabacum and contains 3 PF|00076 RNA
recognition motif domains. ESTs gb|T44278, gb|R65195,
gb|N65904, gb|H37499, gb|R90487, gb|N95952, gb|T44278,
gb|Z20166, gb|N96891, gb|W43137, gb|F15504, gb|F1
Length = 405
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 428 DYLLMRGELISDVSDLITVENFEPVY 505
DY + G+L +DV+D I +E F Y
Sbjct: 154 DYTIFVGDLAADVTDYILLETFRASY 179
>At1g11650.1 68414.m01336 RNA-binding protein 45 (RBP45), putative
similar to gb|U90212 DNA binding protein ACBF from
Nicotiana tabacum and contains 3 PF|00076 RNA
recognition motif domains. ESTs gb|T44278, gb|R65195,
gb|N65904, gb|H37499, gb|R90487, gb|N95952, gb|T44278,
gb|Z20166, gb|N96891, gb|W43137, gb|F15504, gb|F1
Length = 306
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 428 DYLLMRGELISDVSDLITVENFEPVY 505
DY + G+L +DV+D I +E F Y
Sbjct: 154 DYTIFVGDLAADVTDYILLETFRASY 179
>At1g55350.4 68414.m06326 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 336 WAPIARYCTDASTS-VCICACMLSLQGLCIVTHSEDTFAG 220
WA Y T TS VC A +L L + H + FAG
Sbjct: 960 WASNNFYLTRKQTSFVCFLALLLGLAAFLLGWHQDKAFAG 999
>At1g55350.3 68414.m06325 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 336 WAPIARYCTDASTS-VCICACMLSLQGLCIVTHSEDTFAG 220
WA Y T TS VC A +L L + H + FAG
Sbjct: 960 WASNNFYLTRKQTSFVCFLALLLGLAAFLLGWHQDKAFAG 999
>At1g55350.2 68414.m06324 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 336 WAPIARYCTDASTS-VCICACMLSLQGLCIVTHSEDTFAG 220
WA Y T TS VC A +L L + H + FAG
Sbjct: 960 WASNNFYLTRKQTSFVCFLALLLGLAAFLLGWHQDKAFAG 999
>At1g55350.1 68414.m06323 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 336 WAPIARYCTDASTS-VCICACMLSLQGLCIVTHSEDTFAG 220
WA Y T TS VC A +L L + H + FAG
Sbjct: 960 WASNNFYLTRKQTSFVCFLALLLGLAAFLLGWHQDKAFAG 999
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,554,355
Number of Sequences: 28952
Number of extensions: 256018
Number of successful extensions: 718
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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