Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_P22
         (822 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    36   6e-04
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    31   0.017
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    29   0.069
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    27   0.21 
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    26   0.48 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      25   0.64 
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    25   1.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   4.5  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   7.9  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 35.5 bits (78), Expect = 6e-04
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
 Frame = -1

Query: 726 SIFRIP-CNRMXLITXIYQYMRXRL*FRVPFAIKMLKRENKRVHLKECRRSSLRCE-CGR 553
           S+F  P C     +T I +     L  +  F  K L + + R H KE      RC  CG+
Sbjct: 41  SVFTSPACGSETPLTNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGKE-GEDPYRCNICGK 99

Query: 552 VFKSKISLAEHIHS---------DHTSK---ITDNTELKLAPVSTNEYNYTCEVCEQKFK 409
            F     L  H  +         ++ SK   + +N  +    + T E  Y C+VCE+ F+
Sbjct: 100 TFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRR-IHTKERPYKCDVCERAFE 158

Query: 408 RRGILVNHLWRVH 370
             G L  H+ R+H
Sbjct: 159 HSGKLHRHM-RIH 170



 Score = 29.1 bits (62), Expect = 0.052
 Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
 Frame = -2

Query: 323 FPCVVCPKVYGTAAKRNQHVRVHHPGAEKIPAQ------SIEGGVRVYE-------PAQC 183
           + C +C K +   A+  +H R H  G +    +      S++  + V+        P +C
Sbjct: 92  YRCNICGKTFAVPARLTRHYRTH-TGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKC 150

Query: 182 SFCPRQYATRAKMLQHARLH 123
             C R +    K+ +H R+H
Sbjct: 151 DVCERAFEHSGKLHRHMRIH 170



 Score = 27.1 bits (57), Expect = 0.21
 Identities = 16/74 (21%), Positives = 33/74 (44%)
 Frame = -2

Query: 344 LEKRVRHFPCVVCPKVYGTAAKRNQHVRVHHPGAEKIPAQSIEGGVRVYEPAQCSFCPRQ 165
           +  + R + C VC + +  + K ++H+R+H              G R   P +C+ C + 
Sbjct: 141 IHTKERPYKCDVCERAFEHSGKLHRHMRIH-------------TGER---PHKCTVCSKT 184

Query: 164 YATRAKMLQHARLH 123
           +    +++ H R H
Sbjct: 185 FIQSGQLVIHMRTH 198



 Score = 25.0 bits (52), Expect = 0.85
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 456 TNEYNYTCEVCEQKFKRRGILVNHLWRVHNIS 361
           T E  YTC++C + F       NH+ ++H ++
Sbjct: 227 TGEKPYTCDICGKSFG-----YNHVLKLHQVA 253


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 30.7 bits (66), Expect = 0.017
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = -1

Query: 561 CGRVFKSKISLAEHIHSDHTSKITDNTELKLAPVSTNEYNYTCEVCEQKFKRRGILVNHL 382
           CG+V  SK SL  H+   H  +               +  Y C +CE+ +  R  L+ H+
Sbjct: 11  CGKVLCSKASLKRHVADKHAER---------------QEEYRCVICERVYCSRNSLMTHI 55

Query: 381 WRVH 370
           +  H
Sbjct: 56  YTYH 59



 Score = 27.5 bits (58), Expect = 0.16
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 624 LKRENKRVHLKECRRSSLRCE-CGRVFKSKISLAEHIHSDHTSKITD 487
           LKR     H +  R+   RC  C RV+ S+ SL  HI++ H S+  D
Sbjct: 21  LKRHVADKHAE--RQEEYRCVICERVYCSRNSLMTHIYTYHKSRPGD 65



 Score = 26.6 bits (56), Expect = 0.28
 Identities = 19/68 (27%), Positives = 28/68 (41%)
 Frame = -2

Query: 323 FPCVVCPKVYGTAAKRNQHVRVHHPGAEKIPAQSIEGGVRVYEPAQCSFCPRQYATRAKM 144
           F C +C KV  + A   +HV   H  AE+             E  +C  C R Y +R  +
Sbjct: 6   FTCQLCGKVLCSKASLKRHVADKH--AER------------QEEYRCVICERVYCSRNSL 51

Query: 143 LQHARLHH 120
           + H   +H
Sbjct: 52  MTHIYTYH 59



 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 338 KRVRHFPCVVCPKVYGTAAKRNQHVRVHH 252
           +R   + CV+C +VY +      H+  +H
Sbjct: 31  ERQEEYRCVICERVYCSRNSLMTHIYTYH 59



 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 717 RIPCNRMXLITXIYQYMRXR 658
           R+ C+R  L+T IY Y + R
Sbjct: 43  RVYCSRNSLMTHIYTYHKSR 62


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 28.7 bits (61), Expect = 0.069
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 197 EPAQCSFCPRQYATRAKMLQHARLH 123
           +P  CS C RQ+   A + +H R+H
Sbjct: 36  KPYHCSHCDRQFVQVANLRRHLRVH 60



 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 456 TNEYNYTCEVCEQKFKRRGILVNHLWRVH 370
           T E  Y C  C+++F +   L  HL RVH
Sbjct: 33  TGEKPYHCSHCDRQFVQVANLRRHL-RVH 60


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 185 CSFCPRQYATRAKMLQHARLHH 120
           C FC R+Y T+  +  H  L H
Sbjct: 38  CEFCNRRYRTKNSLTTHKSLQH 59



 Score = 23.4 bits (48), Expect = 2.6
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 441 YTCEVCEQKFKRRGILVNH 385
           Y CE C ++++ +  L  H
Sbjct: 36  YVCEFCNRRYRTKNSLTTH 54


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 329 RHFPCVVCPKVYGTAAKRNQHVRVH 255
           + F C  C KVY +      H+R H
Sbjct: 15  KSFSCKYCEKVYVSLGALKMHIRTH 39



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 6/21 (28%), Positives = 10/21 (47%)
 Frame = -2

Query: 185 CSFCPRQYATRAKMLQHARLH 123
           C +C + Y +   +  H R H
Sbjct: 19  CKYCEKVYVSLGALKMHIRTH 39


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
 Frame = -2

Query: 398 YWLTICGAFTIYPIXKVPLEKRVRHFP------CVVCPKVYGTAAKRNQHVRVHH 252
           Y   +CG  T+     +   K  +HF       C +C KV+ T    N H  ++H
Sbjct: 372 YTCDVCGK-TLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYH 425


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/79 (20%), Positives = 29/79 (36%)
 Frame = -2

Query: 323 FPCVVCPKVYGTAAKRNQHVRVHHPGAEKIPAQSIEGGVRVYEPAQCSFCPRQYATRAKM 144
           F C  C K+  +  +  +H++  H    K P               C+ C R Y++   +
Sbjct: 3   FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPI--------------CNICKRVYSSLNSL 48

Query: 143 LQHARLHHPHLMKRRVEEK 87
             H  ++H    K   + K
Sbjct: 49  RNHKSIYHRQHSKNEQQRK 67


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 446 YSFVETGANLSSVLSVIFEVWSE*MCSARLILLLKTLPHSHL 571
           Y    T  +    L V+ +V+ +  C+AR I+L +    SHL
Sbjct: 202 YQIYATLGSFYIPLFVMIQVYYKIFCAARRIVLEERRAQSHL 243


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -3

Query: 334 ACAISRAWCAPKCTEPPRRGTN 269
           AC  SR    P C E   RG N
Sbjct: 2   ACPFSRDLSKPGCDEQTSRGDN 23


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = -2

Query: 308 CPKVYGTAAKRNQHVRVHHPGAEKIPAQSIEG 213
           CP   GT  + + H+++    A +   + I G
Sbjct: 270 CPTNLGTTVRASVHIKLPKLAANRAKLEEIAG 301


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,937
Number of Sequences: 438
Number of extensions: 4652
Number of successful extensions: 33
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)