Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_P21
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    25   0.62 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    24   1.9  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    24   1.9  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         22   5.8  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   7.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   7.6  

>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 445 PKRSSQARTDAEPHAAPGAN 504
           P R ++ R +AEP A PG N
Sbjct: 26  PTRPTRLRREAEPEAEPGNN 45


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 445 PKRSSQARTDAEPHAAPGAN 504
           P R ++ R +A+P A PG N
Sbjct: 25  PTRPTRLRREAKPEAEPGNN 44


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 445 PKRSSQARTDAEPHAAPGAN 504
           P R ++ R +A+P A PG N
Sbjct: 26  PTRPARLRREAKPEAEPGNN 45


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -2

Query: 516 CLHYVRAGCSVRLGVCSC 463
           CL   R G S R GVC C
Sbjct: 85  CLAQRRKGGSCRNGVCIC 102


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 576 IVRAPHRSRYSCLPLRLHRSCL 511
           ++R+P    +S  P  +H+SC+
Sbjct: 468 VLRSPPAFSHSRCPPEIHKSCI 489


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 576 IVRAPHRSRYSCLPLRLHRSCL 511
           ++R+P    +S  P  +H+SC+
Sbjct: 468 VLRSPPAFSHSRCPPEIHKSCI 489


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,569
Number of Sequences: 438
Number of extensions: 2448
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)