Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_P11
         (869 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.5  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 413 QRPFH*RTVQVGPSEFLTLIFSTANLRDRIRS 508
           Q P+   T+Q+ P E LTL   T+N  +  +S
Sbjct: 462 QFPYVHDTLQIQPQEQLTLSKVTSNYHEEFQS 493


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 223 GTIVICA*QLLDIIESDMCLISLIALKE 306
           GT+  C   L    E D CL++  ALK+
Sbjct: 433 GTLQRCLLSLEKTYERDTCLLASDALKQ 460


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 223 GTIVICA*QLLDIIESDMCLISLIALKE 306
           GT+  C   L    E D CL++  ALK+
Sbjct: 471 GTLQRCLLSLEKTYERDTCLLASDALKQ 498


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -1

Query: 296  AIKEIKHMS----DSIISNSCYAQITMVPFVLLFNLVILKLTPKFG 171
            A+KE K M+    D+  S   +   T +PFV  FN  ++KLT   G
Sbjct: 907  AVKEGKFMNVNMLDTYESVHSFPTETGLPFVYTFN--VIKLTKTSG 950


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,965
Number of Sequences: 438
Number of extensions: 4281
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)