Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_P09
(795 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 246 2e-67
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 246 2e-67
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 4.3
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 4.3
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 5.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 5.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 5.7
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 10.0
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 246 bits (602), Expect = 2e-67
Identities = 110/135 (81%), Positives = 125/135 (92%)
Frame = -3
Query: 637 RLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 458
RLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YFGFYDTAR
Sbjct: 142 RLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTAR 201
Query: 457 GMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWA 278
GMLPDPK TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWA
Sbjct: 202 GMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWA 261
Query: 277 TIAKTEGTSAFXQGS 233
TI KTEG +AF +G+
Sbjct: 262 TIYKTEGGNAFFKGA 276
Score = 51.6 bits (118), Expect = 8e-09
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -1
Query: 240 KGAFSNVLRGTGGAFVLVLYDEIKKVL 160
KGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 274 KGAFSNILRGTGGALVLVLYDEIKNLL 300
Score = 49.2 bits (112), Expect = 4e-08
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -2
Query: 713 GNLASRGAAGATSLCFVYPLDFA 645
GNLAS GAAGATSLCFVYPLDFA
Sbjct: 117 GNLASGGAAGATSLCFVYPLDFA 139
Score = 35.5 bits (78), Expect = 6e-04
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 6/129 (4%)
Frame = -3
Query: 604 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 431
++ + G+ +C +I K G + +RG +V +A F F D + + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 430 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 263
+ + AG S YP D R R+ G+A + + +C I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169
Query: 262 EGTSAFXQG 236
+G + +G
Sbjct: 170 DGITGLYRG 178
Score = 35.1 bits (77), Expect = 8e-04
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1
Query: 783 RXKYKQVFXGGVDKXTQXWRY 721
+ KYKQVF GGVDK TQ RY
Sbjct: 94 KDKYKQVFLGGVDKNTQFLRY 114
Score = 26.2 bits (55), Expect = 0.35
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 412 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFXQ 239
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++ +
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 238 GSL 230
G+L
Sbjct: 75 GNL 77
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 246 bits (602), Expect = 2e-67
Identities = 110/135 (81%), Positives = 125/135 (92%)
Frame = -3
Query: 637 RLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 458
RLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YFGFYDTAR
Sbjct: 142 RLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTAR 201
Query: 457 GMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWA 278
GMLPDPK TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWA
Sbjct: 202 GMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWA 261
Query: 277 TIAKTEGTSAFXQGS 233
TI KTEG +AF +G+
Sbjct: 262 TIYKTEGGNAFFKGA 276
Score = 51.6 bits (118), Expect = 8e-09
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -1
Query: 240 KGAFSNVLRGTGGAFVLVLYDEIKKVL 160
KGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 274 KGAFSNILRGTGGALVLVLYDEIKNLL 300
Score = 49.2 bits (112), Expect = 4e-08
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -2
Query: 713 GNLASRGAAGATSLCFVYPLDFA 645
GNLAS GAAGATSLCFVYPLDFA
Sbjct: 117 GNLASGGAAGATSLCFVYPLDFA 139
Score = 35.5 bits (78), Expect = 6e-04
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 6/129 (4%)
Frame = -3
Query: 604 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 431
++ + G+ +C +I K G + +RG +V +A F F D + + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 430 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 263
+ + AG S YP D R R+ G+A + + +C I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169
Query: 262 EGTSAFXQG 236
+G + +G
Sbjct: 170 DGITGLYRG 178
Score = 35.1 bits (77), Expect = 8e-04
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1
Query: 783 RXKYKQVFXGGVDKXTQXWRY 721
+ KYKQVF GGVDK TQ RY
Sbjct: 94 KDKYKQVFLGGVDKNTQFLRY 114
Score = 26.2 bits (55), Expect = 0.35
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 412 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFXQ 239
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++ +
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 238 GSL 230
G+L
Sbjct: 75 GNL 77
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 170 LISSYKTSTKAPPVPLRTLEKAPL 241
L++++KT T+ P + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 667 SCTPSTSHVXRLAAD 623
SC PS HV + A D
Sbjct: 158 SCVPSVKHVAKCATD 172
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 7 FFFLWNHCMTLYLTKNKLLKSFSCLIIHD 93
F F W+ CM L L N ++ + +D
Sbjct: 87 FRFYWDLCMLLLLVANLIILPVAISFFND 115
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 7 FFFLWNHCMTLYLTKNKLLKSFSCLIIHD 93
F F W+ CM L L N ++ + +D
Sbjct: 87 FRFYWDLCMLLLLVANLIILPVAISFFND 115
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 7 FFFLWNHCMTLYLTKNKLLKSFSCLIIHD 93
F F W+ CM L L N ++ + +D
Sbjct: 87 FRFYWDLCMLLLLVANLIILPVAISFFND 115
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.4 bits (43), Expect = 10.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 737 RSXGXTXAGNLASRGAAGATSLCFVYPLDF 648
RS T + + R A A ++CF+Y L +
Sbjct: 258 RSNANTSSQSAEIRIAKAAITICFLYVLSW 287
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,550
Number of Sequences: 438
Number of extensions: 4132
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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