Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_P06
(855 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein. 33 1.7
BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear r... 33 1.7
BC004511-1|AAH04511.2| 207|Homo sapiens HNRPH3 protein protein. 33 1.7
AL117395-1|CAB55897.1| 215|Homo sapiens hypothetical protein pr... 33 1.7
AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear r... 33 1.7
AF132364-1|AAF68852.1| 139|Homo sapiens hnRNP 2H9E protein. 33 1.7
AF132363-1|AAF68851.1| 145|Homo sapiens hnRNP 2H9D protein. 33 1.7
AF132362-1|AAF68850.1| 297|Homo sapiens hnRNP 2H9B protein. 33 1.7
AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein. 33 1.7
AF132360-6|AAF68846.1| 139|Homo sapiens hnRNP 2H9E protein. 33 1.7
AF132360-5|AAF68845.1| 145|Homo sapiens hnRNP 2H9D protein. 33 1.7
AF132360-4|AAF68848.1| 215|Homo sapiens hnRNP 2H9C protein. 33 1.7
AF132360-3|AAF68844.1| 297|Homo sapiens hnRNP 2H9B protein. 33 1.7
AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein. 33 1.7
AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein. 33 1.7
>L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein.
Length = 346
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 149 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 192
>BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear
ribonucleoprotein H3 (2H9) protein.
Length = 331
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 134 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 177
>BC004511-1|AAH04511.2| 207|Homo sapiens HNRPH3 protein protein.
Length = 207
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 10 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 53
>AL117395-1|CAB55897.1| 215|Homo sapiens hypothetical protein
protein.
Length = 215
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 18 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 61
>AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear
ribonucleoprotein H3 isoform a variant protein.
Length = 346
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 149 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 192
>AF132364-1|AAF68852.1| 139|Homo sapiens hnRNP 2H9E protein.
Length = 139
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 12 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 55
>AF132363-1|AAF68851.1| 145|Homo sapiens hnRNP 2H9D protein.
Length = 145
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 18 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 61
>AF132362-1|AAF68850.1| 297|Homo sapiens hnRNP 2H9B protein.
Length = 297
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 100 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 143
>AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein.
Length = 331
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 134 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 177
>AF132360-6|AAF68846.1| 139|Homo sapiens hnRNP 2H9E protein.
Length = 139
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 12 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 55
>AF132360-5|AAF68845.1| 145|Homo sapiens hnRNP 2H9D protein.
Length = 145
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 18 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 61
>AF132360-4|AAF68848.1| 215|Homo sapiens hnRNP 2H9C protein.
Length = 215
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 18 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 61
>AF132360-3|AAF68844.1| 297|Homo sapiens hnRNP 2H9B protein.
Length = 297
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 100 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 143
>AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein.
Length = 331
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 134 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 177
>AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein.
Length = 346
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 491 GADQGGDYQNRS-NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 345
G D G Y N +GF +R DG GG GY G GD S G H
Sbjct: 149 GFDDYGGYNNYGYGNDGFDDRMRDG------RGMGGHGYGGAGDASSGFH 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,150,481
Number of Sequences: 237096
Number of extensions: 2169224
Number of successful extensions: 9805
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9799
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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