Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_P03
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 37 0.072
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 33 0.89
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 33 1.2
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 33 1.2
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 1.2
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 33 1.2
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 33 1.2
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 33 1.2
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 1.2
AK124971-1|BAC86011.1| 172|Homo sapiens protein ( Homo sapiens ... 32 2.1
AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa varia... 31 4.7
AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa varia... 31 4.7
AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens ... 31 4.7
AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein... 31 4.7
U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog o... 31 6.3
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 6.3
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 6.3
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 6.3
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 6.3
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 6.3
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 6.3
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 6.3
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 30 8.3
Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein. 30 8.3
X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein. 30 8.3
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 30 8.3
CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein. 30 8.3
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 30 8.3
BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2... 30 8.3
BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.3
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 30 8.3
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 30 8.3
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 30 8.3
AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 8.3
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 8.3
AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 8.3
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 8.3
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein. 30 8.3
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein. 30 8.3
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro... 30 8.3
AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein. 30 8.3
AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein pro... 30 8.3
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 30 8.3
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 37.1 bits (82), Expect = 0.072
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Frame = -1
Query: 771 SKGPXGQTXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRT 604
S+ T R+ S+ S RR +R P+ R +++ TP T + S + R
Sbjct: 1900 SRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTP---TTRRRSRSRTPPVTRR 1956
Query: 603 PSRYQCPPLTPSRSTSRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 442
SR + PP+T RS SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 1957 RSRSRTPPVTRRRSRSRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 2010
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 741 RAYSQTSXYPRREARPIXR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSRYQCPPLTPSR 565
R+ S+T R +R R +++ TP + + ++ P+ RS+ R+P R + +P+R
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 642
Query: 564 STSRTQ*KRPCRSQLTSPSTGHTQSTSRS 478
+ R++ + P R + T + SRS
Sbjct: 643 RSGRSRSRTPARRGRSRSRTPARRGRSRS 671
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 33.5 bits (73), Expect = 0.89
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = -1
Query: 672 CPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQ 493
CP PL+ P S T S Y C PL S +T T P LTSP+T T
Sbjct: 20 CPPPLRGR-----PGSSTELAPTISHYDCSPLD-STATPSTPGTAPPPKVLTSPATTPTA 73
Query: 492 STSRST 475
++S++T
Sbjct: 74 TSSKAT 79
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 741 RAYSQTSXYPRREARPIXR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSRYQCPPLTPSR 565
R+ S+T R +R R +++ TP + + ++ P+ RS+ R+P R + +P+R
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 642
Query: 564 STSRTQ*KRPCRSQLTSPSTGHTQSTSRS 478
+ R++ + P R + T + SRS
Sbjct: 643 RSGRSRSRTPARRGRSRSRTPARRGRSRS 671
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 33.1 bits (72), Expect = 1.2
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R P+ R +++ T + + S + R SR + P
Sbjct: 904 THRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVT---RRRSRSRASPVSRRRSRSRTP 960
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 442
P+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 961 PVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 1006
Score = 31.1 bits (67), Expect = 4.7
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R P+ R +++ T + S + R SR +
Sbjct: 974 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRT--SPITRRRSRSRTSPVTRRRSRSRTS 1031
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 427
P+T RS SRT RS+ +P +S SR+ L RS R+ L R
Sbjct: 1032 PVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR 1083
Score = 30.3 bits (65), Expect = 8.3
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R PI R +++ T + S + R SR +
Sbjct: 986 TRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT--SPVTRRRSRSRTSPVTRRRSRSRTS 1043
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 442
P+T RS SRT RS+ +P +S SRS RS RT
Sbjct: 1044 PVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRT 1090
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 741 RAYSQTSXYPRREARPIXR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSRYQCPPLTPSR 565
R+ S+T R +R R +++ TP + + ++ P+ RS+ R+P R + +P+R
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 642
Query: 564 STSRTQ*KRPCRSQLTSPSTGHTQSTSRS 478
+ R++ + P R + T + SRS
Sbjct: 643 RSGRSRSRTPARRGRSRSRTPARRGRSRS 671
Score = 33.1 bits (72), Expect = 1.2
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R P+ R +++ T + + S + R SR + P
Sbjct: 1872 THRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVT---RRRSRSRASPVSRRRSRSRTP 1928
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 442
P+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 1929 PVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 1974
Score = 31.1 bits (67), Expect = 4.7
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R P+ R +++ T + S + R SR +
Sbjct: 1942 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRT--SPITRRRSRSRTSPVTRRRSRSRTS 1999
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 427
P+T RS SRT RS+ +P +S SR+ L RS R+ L R
Sbjct: 2000 PVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR 2051
Score = 30.3 bits (65), Expect = 8.3
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R PI R +++ T + S + R SR +
Sbjct: 1954 TRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT--SPVTRRRSRSRTSPVTRRRSRSRTS 2011
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 442
P+T RS SRT RS+ +P +S SRS RS RT
Sbjct: 2012 PVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRT 2058
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 33.1 bits (72), Expect = 1.2
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R P+ R +++ T + + S + R SR + P
Sbjct: 395 THRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVT---RRRSRSRASPVSRRRSRSRTP 451
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 442
P+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 452 PVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 497
Score = 31.1 bits (67), Expect = 4.7
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R P+ R +++ T + S + R SR +
Sbjct: 465 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRT--SPITRRRSRSRTSPVTRRRSRSRTS 522
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 427
P+T RS SRT RS+ +P +S SR+ L RS R+ L R
Sbjct: 523 PVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR 574
Score = 30.3 bits (65), Expect = 8.3
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R PI R +++ T + S + R SR +
Sbjct: 477 TRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT--SPVTRRRSRSRTSPVTRRRSRSRTS 534
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 442
P+T RS SRT RS+ +P +S SRS RS RT
Sbjct: 535 PVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRT 581
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 741 RAYSQTSXYPRREARPIXR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSRYQCPPLTPSR 565
R+ S+T R +R R +++ TP + + ++ P+ RS+ R+P R + +P+R
Sbjct: 548 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 607
Query: 564 STSRTQ*KRPCRSQLTSPSTGHTQSTSRS 478
+ R++ + P R + T + SRS
Sbjct: 608 RSGRSRSRTPARRGRSRSRTPARRGRSRS 636
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 741 RAYSQTSXYPRREARPIXR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSRYQCPPLTPSR 565
R+ S+T R +R R +++ TP + + ++ P+ RS+ R+P R + +P+R
Sbjct: 373 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 432
Query: 564 STSRTQ*KRPCRSQLTSPSTGHTQSTSRS 478
+ R++ + P R + T + SRS
Sbjct: 433 RSGRSRSRTPARRGRSRSRTPARRGRSRS 461
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -1
Query: 741 RAYSQTSXYPRREARPIXR*KNQCPTPLKYTLT-AQCPSMSRSQFRTPSRYQCPPLTPSR 565
R+ S+T R +R R +++ TP + + ++ P+ RS+ R+P R + +P+R
Sbjct: 631 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPAR 690
Query: 564 STSRTQ*KRPCRSQLTSPSTGHTQSTSRS 478
+ R++ + P R + T + SRS
Sbjct: 691 RSGRSRSRTPARRGRSRSRTPARRGRSRS 719
Score = 33.1 bits (72), Expect = 1.2
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R P+ R +++ T + + S + R SR + P
Sbjct: 1920 THRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVT---RRRSRSRASPVSRRRSRSRTP 1976
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 442
P+T RS SRT R RS+ +P +S SR+ + RS RT
Sbjct: 1977 PVTRRRSRSRTPTTRR-RSRSRTPPVTRRRSRSRTPPVTRRRSRSRT 2022
Score = 31.1 bits (67), Expect = 4.7
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R P+ R +++ T + S + R SR +
Sbjct: 1990 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRT--SPITRRRSRSRTSPVTRRRSRSRTS 2047
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLRYR 427
P+T RS SRT RS+ +P +S SR+ L RS R+ L R
Sbjct: 2048 PVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIR 2099
Score = 30.3 bits (65), Expect = 8.3
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = -1
Query: 750 TXPRAYSQTSXYPRREAR----PIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 583
T R+ S+T RR +R PI R +++ T + S + R SR +
Sbjct: 2002 TRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT--SPVTRRRSRSRTSPVTRRRSRSRTS 2059
Query: 582 PLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 442
P+T RS SRT RS+ +P +S SRS RS RT
Sbjct: 2060 PVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRT 2106
>AK124971-1|BAC86011.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ42981 fis, clone BRTHA2007422. ).
Length = 172
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 620 EASSVPRQGTSARPLPRREAHPVPSRKGRAVPS*HP 513
EA R G + P PR+ HP+P + +P+ HP
Sbjct: 20 EAPGATRVGPPSTPAPRKVRHPLPPSQAGILPALHP 55
>AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 507
Score = 31.1 bits (67), Expect = 4.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 480 FSMWTGYGLSTGMLTGNGTAFSTGYG 557
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 508
Score = 31.1 bits (67), Expect = 4.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 480 FSMWTGYGLSTGMLTGNGTAFSTGYG 557
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ10655 fis, clone NT2RP2005933, weakly similar to
NUCLEOPORIN NUP57. ).
Length = 484
Score = 31.1 bits (67), Expect = 4.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 480 FSMWTGYGLSTGMLTGNGTAFSTGYG 557
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein
protein.
Length = 505
Score = 31.1 bits (67), Expect = 4.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 480 FSMWTGYGLSTGMLTGNGTAFSTGYG 557
F TG+G +TG TG GT TG G
Sbjct: 60 FGFGTGFGTTTGTSTGLGTGLGTGLG 85
>U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog of
Drosophila splicing regulator suppressor-of-white-apricot
mRNA, complete cds. ).
Length = 951
Score = 30.7 bits (66), Expect = 6.3
Identities = 30/82 (36%), Positives = 38/82 (46%)
Frame = -1
Query: 753 QTXPRAYSQTSXYPRREARPIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLT 574
+T R+ S+ S PRR A R + + P Y ++ + P SR RT SR
Sbjct: 797 RTVRRSRSR-SRSPRRRAHSPERRREERSVPTAYRVS-RSPGASRK--RTRSRSPHEKKK 852
Query: 573 PSRSTSRTQ*KRPCRSQLTSPS 508
RS SRT K RSQ SPS
Sbjct: 853 KRRSRSRT--KSKARSQSVSPS 872
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 6.3
Identities = 28/100 (28%), Positives = 39/100 (39%)
Frame = -1
Query: 774 PSKGPXGQTXPRAYSQTSXYPRREARPIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSR 595
P+ P +T + S PRR + PI R + P P + T + P R+ P +
Sbjct: 573 PTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK 632
Query: 594 YQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 475
+ P + S KR RS S S SRST
Sbjct: 633 RRVSHSPPPKQRSSPVTKR--RSPSLSSKHRKGSSPSRST 670
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 608 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 489
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 600 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 639
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 6.3
Identities = 28/100 (28%), Positives = 39/100 (39%)
Frame = -1
Query: 774 PSKGPXGQTXPRAYSQTSXYPRREARPIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSR 595
P+ P +T + S PRR + PI R + P P + T + P R+ P +
Sbjct: 573 PTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK 632
Query: 594 YQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 475
+ P + S KR RS S S SRST
Sbjct: 633 RRVSHSPPPKQRSSPVTKR--RSPSLSSKHRKGSSPSRST 670
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 608 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 489
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 600 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 639
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 6.3
Identities = 28/100 (28%), Positives = 39/100 (39%)
Frame = -1
Query: 774 PSKGPXGQTXPRAYSQTSXYPRREARPIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSR 595
P+ P +T + S PRR + PI R + P P + T + P R+ P +
Sbjct: 582 PTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK 641
Query: 594 YQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 475
+ P + S KR RS S S SRST
Sbjct: 642 RRVSHSPPPKQRSSPVTKR--RSPSLSSKHRKGSSPSRST 679
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 608 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 489
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 609 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 648
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 6.3
Identities = 28/100 (28%), Positives = 39/100 (39%)
Frame = -1
Query: 774 PSKGPXGQTXPRAYSQTSXYPRREARPIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSR 595
P+ P +T + S PRR + PI R + P P + T + P R+ P +
Sbjct: 573 PTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK 632
Query: 594 YQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 475
+ P + S KR RS S S SRST
Sbjct: 633 RRVSHSPPPKQRSSPVTKR--RSPSLSSKHRKGSSPSRST 670
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 608 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 489
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 600 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 639
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 6.3
Identities = 28/100 (28%), Positives = 39/100 (39%)
Frame = -1
Query: 774 PSKGPXGQTXPRAYSQTSXYPRREARPIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSR 595
P+ P +T + S PRR + PI R + P P + T + P R+ P +
Sbjct: 582 PTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK 641
Query: 594 YQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 475
+ P + S KR RS S S SRST
Sbjct: 642 RRVSHSPPPKQRSSPVTKR--RSPSLSSKHRKGSSPSRST 679
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 608 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 489
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 609 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 648
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 6.3
Identities = 28/100 (28%), Positives = 39/100 (39%)
Frame = -1
Query: 774 PSKGPXGQTXPRAYSQTSXYPRREARPIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSR 595
P+ P +T + S PRR + PI R + P P + T + P R+ P +
Sbjct: 571 PTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK 630
Query: 594 YQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 475
+ P + S KR RS S S SRST
Sbjct: 631 RRVSHSPPPKQRSSPVTKR--RSPSLSSKHRKGSSPSRST 668
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 608 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 489
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 598 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 637
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 6.3
Identities = 28/100 (28%), Positives = 39/100 (39%)
Frame = -1
Query: 774 PSKGPXGQTXPRAYSQTSXYPRREARPIXR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSR 595
P+ P +T + S PRR + PI R + P P + T + P R+ P +
Sbjct: 571 PTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK 630
Query: 594 YQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 475
+ P + S KR RS S S SRST
Sbjct: 631 RRVSHSPPPKQRSSPVTKR--RSPSLSSKHRKGSSPSRST 668
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 608 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 489
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 598 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 637
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 907 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 938
>Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein.
Length = 513
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGY 554
+S CT T WTGY ST LT +S G+
Sbjct: 404 YSSCTVTTVQPWTGYPTSTSPLTSPRGPWSLGW 436
>X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 557
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 570 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 433
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 557
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 570 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 433
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 557
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 557
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 557
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 557
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 557
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 557
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 557
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 456 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 557
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 570 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 433
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 570 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 433
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 570 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 433
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
protein.
Length = 1113
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 641 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 672
>AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein.
Length = 699
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 633 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 664
>AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein
protein.
Length = 757
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 550 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 455
PV VP PV +PV P P+ + +P IE+
Sbjct: 285 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 316
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 570 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 433
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 369 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 414
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,109,593
Number of Sequences: 237096
Number of extensions: 1492170
Number of successful extensions: 8024
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 7244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7871
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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