BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_P01
(784 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 4.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 7.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 7.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 7.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 7.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 7.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 7.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 7.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 7.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 7.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 7.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 7.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 7.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 7.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 7.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 7.4
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 21 9.8
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 9.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 9.8
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 784 VQVPXXGPCGQXXPRAYSQTRPYPRREARP 695
++V GP G+ P A R P+R A P
Sbjct: 980 IRVIAEGPAGRSVPSAELIVRTEPQRPAGP 1009
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 784 VQVPXXGPCGQXXPRAYSQTRPYPRREARP 695
++V GP G+ P A R P+R A P
Sbjct: 976 IRVIAEGPAGRSVPSAELIVRTEPQRPAGP 1005
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 224 VRSKDVEYVRIWNPTTIL 277
+R V Y R+W P TIL
Sbjct: 77 IRVIRVPYNRVWRPDTIL 94
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 80 RIIPSHYIEQIPVPVYYGNFPP 101
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 91 PVPVYYGNFPPRPIMVRPWVPM 112
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 80 RIIPSHYIEQIPVPVYYGNFPP 101
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 91 PVPVYYGNFPPRPIMVRPWVPM 112
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 80 RIIPSHYIEQIPVPVYYGNFPP 101
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 91 PVPVYYGNFPPRPIMVRPWVPM 112
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 80 RIIPSHYIEQIPVPVYYGNFPP 101
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 91 PVPVYYGNFPPRPIMVRPWVPM 112
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 80 RIIPSHYIEQIPVPVYYGNFPP 101
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 91 PVPVYYGNFPPRPIMVRPWVPM 112
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 80 RIIPSHYIEQIPVPVYYGNFPP 101
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 91 PVPVYYGNFPPRPIMVRPWVPM 112
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 80 RIIPSHYIEQIPVPVYYGNFPP 101
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 91 PVPVYYGNFPPRPIMVRPWVPM 112
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 329 RIIPSHYIEQIPVPVYYGNFPP 350
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 340 PVPVYYGNFPPRPIMVRPWVPM 361
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 329 RIIPSHYIEQIPVPVYYGNFPP 350
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 340 PVPVYYGNFPPRPIMVRPWVPM 361
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 329 RIIPSHYIEQIPVPVYYGNFPP 350
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 340 PVPVYYGNFPPRPIMVRPWVPM 361
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 329 RIIPSHYIEQIPVPVYYGNFPP 350
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 340 PVPVYYGNFPPRPIMVRPWVPM 361
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 329 RIIPSHYIEQIPVPVYYGNFPP 350
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 340 PVPVYYGNFPPRPIMVRPWVPM 361
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 329 RIIPSHYIEQIPVPVYYGNFPP 350
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 340 PVPVYYGNFPPRPIMVRPWVPM 361
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 313 RIIPSHYIEQIPVPVYYGNFPP 334
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 324 PVPVYYGNFPPRPIMVRPWVPM 345
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 329 RIIPSHYIEQIPVPVYYGNFPP 350
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 641 PVPVHVEKPVPYPVQGXQWPPL 576
PVPV+ P P+ W P+
Sbjct: 340 PVPVYYGNFPPRPIMVRPWVPM 361
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 780 KYPXXVHVDXPY 745
KYP VHV PY
Sbjct: 16 KYPMVVHVYHPY 27
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 780 KYPXXVHVDXPY 745
KYP VHV PY
Sbjct: 16 KYPMVVHVYHPY 27
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 644 RPVPVHVEKPVPYPVQGXQWPP 579
R +P H + +P PV +PP
Sbjct: 328 RIIPSHYIEQIPAPVYYGNFPP 349
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,723
Number of Sequences: 438
Number of extensions: 3901
Number of successful extensions: 47
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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