Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_N08
         (825 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.           25   0.85 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    25   1.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    25   1.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   1.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.5  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    22   6.0  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   6.0  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   6.0  

>X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.
          Length = 103

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 774 GGKGSHRSGAKRXSGTKLFNISGHVNTAVHR 682
           GGKG  + GAKR       NI G    A+ R
Sbjct: 7   GGKGLGKGGAKRHRKVLGDNIQGITKPAIRR 37


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 257 RPERRSCALRFVSKFPTACRFLSV 328
           +P +++C   ++SKFPT  + + V
Sbjct: 394 QPRKKNCCRSWLSKFPTRSKRIDV 417


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 257 RPERRSCALRFVSKFPTACRFLSV 328
           +P +++C   ++SKFPT  + + V
Sbjct: 394 QPRKKNCCRSWLSKFPTRSKRIDV 417


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 723 ASCQXYVWRPNDANPCRXPTXRGPTDV 803
           ++C  Y  +   +NPC+ PT   P DV
Sbjct: 55  SACSSYFQKLLLSNPCKHPTIIMPQDV 81


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 662  GCSSPPPRCTAV 697
            GC+SPPP  T++
Sbjct: 1750 GCASPPPAATSM 1761


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 662  GCSSPPPRCTAV 697
            GC+SPPP  T++
Sbjct: 1746 GCASPPPAATSM 1757


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 231 THTSLPARARATHAGVLGRARAEQSRAP 148
           TH+ L    R+TH  V G  R   +R P
Sbjct: 377 THSQLCPTPRSTHLKVSGINRVGSTRRP 404


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 649 LIGRHAGGVTRRLGQPARHH 590
           + G   GG+  R GQP+R H
Sbjct: 70  MTGDAYGGLNIRPGQPSRQH 89


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 692 PCTVEEEMSIPLQGAHWEARGRSHPA 615
           PC  E   S+PL GA  +  G + PA
Sbjct: 469 PCFEEPLPSLPLPGADDDLFGPASPA 494


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -1

Query: 495 GHGGHHCHGQVN*HREGDRSTHH 427
           GHG  H H   + H     + HH
Sbjct: 420 GHGHSHIHATPHHHHSHAATPHH 442


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,460
Number of Sequences: 438
Number of extensions: 4784
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)