Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_M14
         (823 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   1.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   2.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   2.6  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   7.9  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 486 TERNAHLLACAWRNSSAYSDEANL 557
           T+RN +LLA + RN +  +++ NL
Sbjct: 370 TQRNEYLLALSDRNQNVLNNDLNL 393


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 528 NYAKHKQVNGHFVLWQKAMNILKLEDISEAF 436
           ++   ++  G+  LW +A+ +  L D +EAF
Sbjct: 210 HFTNSEEAPGNMGLWDQALALRWLRDNAEAF 240


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 528 NYAKHKQVNGHFVLWQKAMNILKLEDISEAF 436
           ++   ++  G+  LW +A+ +  L D +EAF
Sbjct: 210 HFTNSEEAPGNMGLWDQALALRWLRDNAEAF 240


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 664 ILEKSPGFNNPNCIQFLSEHLGIANT 587
           I E  P   N +C +  S  +GIANT
Sbjct: 53  IKELLPEVLNNHCNRCTSRQIGIANT 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,608
Number of Sequences: 438
Number of extensions: 3937
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)