Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_M06
         (834 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    23   3.5  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    23   3.5  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    23   3.5  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    23   3.5  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    23   3.5  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    23   3.5  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    23   3.5  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    23   3.5  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    23   3.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   4.6  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   6.1  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   8.0  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   8.0  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   8.0  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   8.0  

>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 580 QVPVPAPYPV 551
           Q+PVP P+PV
Sbjct: 110 QIPVPVPFPV 119


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 580 QVPVPAPYPV 551
           Q+PVP P+PV
Sbjct: 110 QIPVPVPFPV 119


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 580 QVPVPAPYPV 551
           Q+PVP P+PV
Sbjct: 110 QIPVPVPFPV 119


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 580 QVPVPAPYPV 551
           Q+PVP P+PV
Sbjct: 110 QIPVPVPFPV 119


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 580 QVPVPAPYPV 551
           Q+PVP P+PV
Sbjct: 343 QIPVPVPFPV 352


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 580 QVPVPAPYPV 551
           Q+PVP P+PV
Sbjct: 343 QIPVPVPFPV 352


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 580 QVPVPAPYPV 551
           Q+PVP P+PV
Sbjct: 343 QIPVPVPFPV 352


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 580 QVPVPAPYPV 551
           Q+PVP P+PV
Sbjct: 343 QIPVPVPFPV 352


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 580 QVPVPAPYPV 551
           Q+PVP P+PV
Sbjct: 332 QIPVPVPFPV 341


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 207 VRSKDVEYVRIWNPTTIL 260
           +R   V Y R+W P TIL
Sbjct: 77  IRVIRVPYNRVWRPDTIL 94


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -3

Query: 589 VPRQVPVPAPYPVEKHIPYPVEKAVPFPVNIP 494
           +P  VP+P P      +P P+   +     IP
Sbjct: 111 IPVPVPIPVPVYYGNFLPRPMGPWISIQEQIP 142


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 580 QVPVPAPYPVEKHI-PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 452
           Q+PVP P PV  +   +P     P+ ++I    P   HI    P
Sbjct: 110 QIPVPVPVPVPVYYGNFPPRSMGPW-ISIQEQIPRFRHIGPSTP 152


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 580 QVPVPAPYPVEKHI-PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 452
           Q+PVP P PV  +   +P     P+ ++I    P   HI    P
Sbjct: 110 QIPVPVPVPVPVYYGNFPPRSMGPW-ISIQEQIPRFRHIGPSTP 152


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 580 QVPVPAPYPVEKHI-PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 452
           Q+PVP P PV  +   +P     P+ ++I    P   HI    P
Sbjct: 110 QIPVPVPVPVPVYYGNFPPRSMGPW-ISIQEQIPRFRHIGPSTP 152


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 580 QVPVPAPYPVEKHI-PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 452
           Q+PVP P PV  +   +P     P+ ++I    P   HI    P
Sbjct: 343 QIPVPVPVPVPVYYGNFPPRSMGPW-ISIQEQIPRFRHIGPSTP 385


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,988
Number of Sequences: 438
Number of extensions: 3780
Number of successful extensions: 56
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)