Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_M02
(794 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.9
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 24 1.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 3.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 3.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 3.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 3.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 3.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 3.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 3.3
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 4.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 7.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 7.5
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 7.5
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 10.0
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 10.0
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.9
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = +2
Query: 332 KAKLHGEILVIGH--ATPSYTRGHI 400
K K+H I+VIGH + S T GH+
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHL 27
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.9
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = +2
Query: 332 KAKLHGEILVIGH--ATPSYTRGHI 400
K K+H I+VIGH + S T GH+
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHL 27
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 450 ILEGKNETFVCKKYILK*NFYR 515
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 450 ILEGKNETFVCKKYILK*NFYR 515
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 450 ILEGKNETFVCKKYILK*NFYR 515
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 450 ILEGKNETFVCKKYILK*NFYR 515
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 450 ILEGKNETFVCKKYILK*NFYR 515
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 450 ILEGKNETFVCKKYILK*NFYR 515
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 450 ILEGKNETFVCKKYILK*NFYR 515
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/52 (21%), Positives = 25/52 (48%)
Frame = +1
Query: 361 HWPCNTKLYTRAYCNGRGTGVNYPKWGKMKFWRVKMKLLCVKSIY*SETSIE 516
+W C + TRA + GT P + M ++K+ ++ + ++ S++
Sbjct: 530 YWNCVIQYNTRAENHQTGTAKMGPSYDPMAVVSPRLKVHGIRGLRVADASVQ 581
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 450 ILEGKNETFVCKKYILK*N 506
I + +NET CKKY + N
Sbjct: 197 IEKSENETKTCKKYAISSN 215
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 7.5
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -3
Query: 681 FV*VDITPWRRTKKKRNSLLFSIFHIIAHMI 589
F+ + W R +KR L +I ++++I
Sbjct: 399 FITAAVDEWPRLLRKRKELFIAIVCFVSYLI 429
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 7.5
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -3
Query: 681 FV*VDITPWRRTKKKRNSLLFSIFHIIAHMI 589
F+ + W R +KR L +I ++++I
Sbjct: 452 FITAAVDEWPRLLRKRKELFIAIVCFVSYLI 482
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Frame = +2
Query: 365 GHAT---PSYTRGHIATVGEPG 421
GHA PSYT +AT PG
Sbjct: 216 GHAQMGRPSYTTATMATTSTPG 237
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 562 NIYIFFFPNYHVGYNMK 612
N+YI FPN V Y+++
Sbjct: 137 NVYIRIFPNGSVLYSIR 153
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 562 NIYIFFFPNYHVGYNMK 612
N+YI FPN V Y+++
Sbjct: 137 NVYIRIFPNGSVLYSIR 153
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,342
Number of Sequences: 438
Number of extensions: 5194
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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