Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_L14
         (814 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    25   1.1  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    25   1.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.5  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   2.5  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    22   7.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   7.8  

>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 339 SSQCIHISYNNYKKTLQKRNI 277
           ++Q +HI + +YKK   K NI
Sbjct: 97  NNQILHILWTSYKKVFMKDNI 117


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 339 SSQCIHISYNNYKKTLQKRNI 277
           ++Q +HI + +YKK   K NI
Sbjct: 80  NNQILHILWTSYKKVFMKDNI 100


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 508 LSSDWQVDYESYDWKKLDPSSEETKKL 428
           LSS+W  DY     +K  P S   +KL
Sbjct: 196 LSSEWDSDYTDKSNEKKIPKSSGWRKL 222


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 332 WLDVGRHSLEYLALVELSTVFVGSVPREVVLDK 430
           W D+ +   ++L  V    V V  V   +V+DK
Sbjct: 41  WNDIAKECEQFLGPVGFGGVQVSPVQENIVIDK 73


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 13/52 (25%), Positives = 19/52 (36%)
 Frame = -2

Query: 435 RNLSRTTSRGTEPTKTVESSTRARYSSECRPTSSQCIHISYNNYKKTLQKRN 280
           R    T+   +   K  E S   +  S          + +YNNY K L  +N
Sbjct: 57  RKYRETSKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNYNKKLYYKN 108


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 712 ETIHXYAEYKYPRGLAKVFMSCN 644
           + +H Y ++ YPR  A  F+  N
Sbjct: 101 DNLHEYLKFSYPRMRAPSFICEN 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,846
Number of Sequences: 438
Number of extensions: 4557
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)