Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_L11
         (867 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    24   1.6  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    24   1.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   4.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.8  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   6.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.4  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   8.4  

>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 11/63 (17%)
 Frame = -2

Query: 323 STDRIFAIVRDLAGSNKTVKVADVIERCVDKGFKPDQ-------VDACIEEXR----ELE 177
           + +++ +  R+L   + T  V ++IE+CV K    D+       +D  +E+ +    ELE
Sbjct: 72  NVEKLESGTRELTPDDFTEDVHEIIEQCVSKAADEDECMVARKYIDCALEKMKFLDDELE 131

Query: 176 RVA 168
           ++A
Sbjct: 132 KIA 134


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 11/63 (17%)
 Frame = -2

Query: 323 STDRIFAIVRDLAGSNKTVKVADVIERCVDKGFKPDQ-------VDACIEEXR----ELE 177
           + +++ +  R+L   + T  V ++IE+CV K    D+       +D  +E+ +    ELE
Sbjct: 72  NVEKLESGTRELTPDDFTEDVHEIIEQCVSKAADEDECMVARKYIDCALEKMKFLDDELE 131

Query: 176 RVA 168
           ++A
Sbjct: 132 KIA 134


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +3

Query: 609 RRTSFMDSARTLLGGWVXCWCXYAMCFASS 698
           R T    +   ++GG+V CW  + + + ++
Sbjct: 300 RETKTAGTLAVVVGGFVACWLPFFILYLAT 329


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +3

Query: 198 DASVHLIWFESFVDAPLDDIGDFDGLVGAGQVAHYRE 308
           +A  + ++  SF+D+  D IGD  G+    +++H+ E
Sbjct: 27  NAIFYQVYPRSFMDSNSDGIGDLKGI--KDKLSHFIE 61



 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +3

Query: 180 KFSXFFDASVHLIWFESFVDAPLDDIG 260
           K S F ++ +  IW      +P+ D G
Sbjct: 55  KLSHFIESGITAIWLSPINRSPMVDFG 81


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 229 PLSTHLSMTSATLTVLLEPARSRTIANIRSVDVIPL 336
           P++     T+  L     P+R+ T++    ++VIPL
Sbjct: 335 PITQSNKRTAGNLATREHPSRNFTMSEDGMIEVIPL 370


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 271 VLLEPARSRTIANIRSVDVIP 333
           ++ EP+  R    IRS DVIP
Sbjct: 515 LVYEPSACRPRHEIRSTDVIP 535


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 474 QVLADVNVTSRAFLASRRSSTYEETMYSASARGTAGSL 587
           QVL + N+    F A          +YS  AR  AGS+
Sbjct: 53  QVLPNGNLVFPPFRAEDYRQEVHAQVYSCLARSPAGSV 90


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 227 FKPDQVDACIEEXRELERVASEPG 156
           F+P     CI   R+ E++  +PG
Sbjct: 666 FQPGDTIICINIKRQKEKIEWDPG 689


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,775
Number of Sequences: 438
Number of extensions: 3634
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)