Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L10
(824 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 25 0.85
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 1.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.9
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 25.0 bits (52), Expect = 0.85
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 147 HTNLYKHVA*VHTGFPI*SIHTL*LCITLLNVRG 248
H LY V+ +TGF I S + C +LLN+ G
Sbjct: 370 HLFLYPEVSSTYTGFGIQSTDFVGDCSSLLNLPG 403
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +3
Query: 465 PVETNHFPQDANLSDRTHDSCKCNWYLSGFTACRTSTL 578
P+E +FP D SCKC Y+ C L
Sbjct: 163 PMELRNFPMDRQSCPLILGSCKC-IYVQSINLCMAGRL 199
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -2
Query: 664 QXXSTIQLSNFSLRYCPTGEWLAVGMENSNVEVLHAVKPDKYQL 533
Q S ++++ +YC + +AVGM V K +K ++
Sbjct: 108 QQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 151
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/28 (25%), Positives = 12/28 (42%)
Frame = -2
Query: 622 YCPTGEWLAVGMENSNVEVLHAVKPDKY 539
+ GEW +GM + + P+ Y
Sbjct: 154 FITNGEWYLIGMPGKKNTITYQCCPEPY 181
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/28 (25%), Positives = 12/28 (42%)
Frame = -2
Query: 622 YCPTGEWLAVGMENSNVEVLHAVKPDKY 539
+ GEW +GM + + P+ Y
Sbjct: 154 FITNGEWYLIGMPGKKNTITYQCCPEPY 181
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/28 (25%), Positives = 12/28 (42%)
Frame = -2
Query: 622 YCPTGEWLAVGMENSNVEVLHAVKPDKY 539
+ GEW +GM + + P+ Y
Sbjct: 154 FITNGEWYLIGMPGKKNTITYQCCPEPY 181
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/28 (25%), Positives = 12/28 (42%)
Frame = -2
Query: 622 YCPTGEWLAVGMENSNVEVLHAVKPDKY 539
+ GEW +GM + + P+ Y
Sbjct: 154 FITNGEWYLIGMPGKKNTITYQCCPEPY 181
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/28 (25%), Positives = 12/28 (42%)
Frame = -2
Query: 622 YCPTGEWLAVGMENSNVEVLHAVKPDKY 539
+ GEW +GM + + P+ Y
Sbjct: 154 FITNGEWYLIGMPGKKNTITYQCCPEPY 181
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/28 (25%), Positives = 12/28 (42%)
Frame = -2
Query: 622 YCPTGEWLAVGMENSNVEVLHAVKPDKY 539
+ GEW +GM + + P+ Y
Sbjct: 154 FITNGEWYLIGMPGKKNTITYQCCPEPY 181
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/28 (25%), Positives = 12/28 (42%)
Frame = -2
Query: 622 YCPTGEWLAVGMENSNVEVLHAVKPDKY 539
+ GEW +GM + + P+ Y
Sbjct: 222 FITNGEWYLIGMPGKKNTITYQCCPEPY 249
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/28 (25%), Positives = 12/28 (42%)
Frame = -2
Query: 622 YCPTGEWLAVGMENSNVEVLHAVKPDKY 539
+ GEW +GM + + P+ Y
Sbjct: 222 FITNGEWYLIGMPGKKNTITYQCCPEPY 249
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,677
Number of Sequences: 438
Number of extensions: 3447
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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