Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_L07
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   10.0 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   10.0 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   10.0 

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 350 LGVQEISCINIAQDHFWLASDRR 418
           +G+Q +S  NI  +HF +   R+
Sbjct: 252 IGLQSLSLTNIQLEHFEMKIKRK 274


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 637 GALYTXRVVLVAALDDALRGRSHQ 708
           GA  T  VVLV A DD ++ ++ Q
Sbjct: 213 GAHITDIVVLVVAADDGVKEQTLQ 236


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +1

Query: 100 FVGFISRQAAACW 138
           FVG +   A  CW
Sbjct: 316 FVGLVGNSAVGCW 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,873
Number of Sequences: 438
Number of extensions: 2702
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)