Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L03
(801 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 38 0.032
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 38 0.032
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 38 0.032
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 38 0.032
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 38 0.032
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 38 0.032
X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting pr... 38 0.056
AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protei... 38 0.056
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 37 0.074
BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein pr... 36 0.13
BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein. 36 0.13
AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrom... 36 0.13
AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein. 36 0.13
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 35 0.39
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 35 0.39
AK096477-1|BAC04801.1| 810|Homo sapiens protein ( Homo sapiens ... 34 0.69
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 33 0.91
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 33 0.91
AK124971-1|BAC86011.1| 172|Homo sapiens protein ( Homo sapiens ... 32 2.1
AY044430-1|AAK95854.1| 621|Homo sapiens transcriptional co-repr... 31 3.7
AK127755-1|BAC87115.1| 271|Homo sapiens protein ( Homo sapiens ... 31 3.7
AK027559-1|BAB55197.1| 1026|Homo sapiens protein ( Homo sapiens ... 31 3.7
AF418569-1|AAP97288.1| 1273|Homo sapiens MSIN3A protein. 31 3.7
AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa varia... 31 4.8
AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa varia... 31 4.8
AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens ... 31 4.8
AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein... 31 4.8
AC005005-2|AAD15618.1| 1056|Homo sapiens WUGSC:H_DJ412A9.2 protein. 31 4.8
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 30 8.5
Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein. 30 8.5
X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein. 30 8.5
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 30 8.5
CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein. 30 8.5
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 30 8.5
BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.5
BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.5
BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.5
BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.5
BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.5
BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.5
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2... 30 8.5
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 8.5
BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.5
BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein. 30 8.5
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 30 8.5
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 30 8.5
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 8.5
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 8.5
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 8.5
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 8.5
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 30 8.5
AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 8.5
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 8.5
AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2... 30 8.5
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2... 30 8.5
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein. 30 8.5
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein. 30 8.5
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 8.5
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro... 30 8.5
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 8.5
AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein. 30 8.5
AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein pro... 30 8.5
AE006465-7|AAK61261.1| 199|Homo sapiens unknown protein. 30 8.5
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 30 8.5
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 38.3 bits (85), Expect = 0.032
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = -3
Query: 673 GRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 494
GR S P + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 571 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 629
Query: 493 TGHTQSTSRSTCLCTLRSPYRTQLR 419
+S SRS + RS RT R
Sbjct: 630 PVRRRSRSRSPARRSGRSRSRTPAR 654
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -3
Query: 694 REARPIPGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 515
R P R S P + ++ P+ RS+ R+P R + +P+R + R++ + P R
Sbjct: 595 RSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPAR 654
Query: 514 SQLTSPSTGHTQSTSRS 464
+ T + SRS
Sbjct: 655 RGRSRSRTPARRGRSRS 671
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 38.3 bits (85), Expect = 0.032
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = -3
Query: 673 GRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 494
GR S P + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 571 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 629
Query: 493 TGHTQSTSRSTCLCTLRSPYRTQLR 419
+S SRS + RS RT R
Sbjct: 630 PVRRRSRSRSPARRSGRSRSRTPAR 654
Score = 34.7 bits (76), Expect = 0.39
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Frame = -3
Query: 697 RREARPIPGRKT-SALPPL-KYTLXAQCPSMSR-SQFRTP------SRYQCPPLTPSRST 545
R A P+ R++ S PP+ + ++ P+ R S+ RTP SR + PP+T RS
Sbjct: 1912 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 1971
Query: 544 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 1972 SRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 2010
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -3
Query: 694 REARPIPGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 515
R P R S P + ++ P+ RS+ R+P R + +P+R + R++ + P R
Sbjct: 595 RSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPAR 654
Query: 514 SQLTSPSTGHTQSTSRS 464
+ T + SRS
Sbjct: 655 RGRSRSRTPARRGRSRS 671
Score = 30.3 bits (65), Expect = 8.5
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Frame = -3
Query: 697 RREARPIPGRKT-SALPPLKYTLXAQCPSMSR--SQFRTP------SRYQCPPLTPSRST 545
R P+ R++ S P + ++ P ++R S+ RTP SR + P+T RS
Sbjct: 1924 RSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSR 1983
Query: 544 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 1984 SRTSPVTRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 2022
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 38.3 bits (85), Expect = 0.032
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = -3
Query: 673 GRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 494
GR S P + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 571 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 629
Query: 493 TGHTQSTSRSTCLCTLRSPYRTQLR 419
+S SRS + RS RT R
Sbjct: 630 PVRRRSRSRSPARRSGRSRSRTPAR 654
Score = 34.7 bits (76), Expect = 0.39
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Frame = -3
Query: 697 RREARPIPGRKT-SALPPL-KYTLXAQCPSMSR-SQFRTP------SRYQCPPLTPSRST 545
R A P+ R++ S PP+ + ++ P+ R S+ RTP SR + PP+T RS
Sbjct: 1912 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 1971
Query: 544 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 1972 SRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 2010
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -3
Query: 694 REARPIPGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 515
R P R S P + ++ P+ RS+ R+P R + +P+R + R++ + P R
Sbjct: 595 RSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPAR 654
Query: 514 SQLTSPSTGHTQSTSRS 464
+ T + SRS
Sbjct: 655 RGRSRSRTPARRGRSRS 671
Score = 30.3 bits (65), Expect = 8.5
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Frame = -3
Query: 697 RREARPIPGRKT-SALPPLKYTLXAQCPSMSR--SQFRTP------SRYQCPPLTPSRST 545
R P+ R++ S P + ++ P ++R S+ RTP SR + P+T RS
Sbjct: 1924 RSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSR 1983
Query: 544 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 1984 SRTSPVTRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 2022
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 38.3 bits (85), Expect = 0.032
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = -3
Query: 673 GRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 494
GR S P + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 536 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 594
Query: 493 TGHTQSTSRSTCLCTLRSPYRTQLR 419
+S SRS + RS RT R
Sbjct: 595 PVRRRSRSRSPARRSGRSRSRTPAR 619
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -3
Query: 694 REARPIPGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 515
R P R S P + ++ P+ RS+ R+P R + +P+R + R++ + P R
Sbjct: 560 RSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPAR 619
Query: 514 SQLTSPSTGHTQSTSRS 464
+ T + SRS
Sbjct: 620 RGRSRSRTPARRGRSRS 636
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 38.3 bits (85), Expect = 0.032
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = -3
Query: 673 GRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 494
GR S P + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 361 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 419
Query: 493 TGHTQSTSRSTCLCTLRSPYRTQLR 419
+S SRS + RS RT R
Sbjct: 420 PVRRRSRSRSPARRSGRSRSRTPAR 444
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -3
Query: 694 REARPIPGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 515
R P R S P + ++ P+ RS+ R+P R + +P+R + R++ + P R
Sbjct: 385 RSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPAR 444
Query: 514 SQLTSPSTGHTQSTSRS 464
+ T + SRS
Sbjct: 445 RGRSRSRTPARRGRSRS 461
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 38.3 bits (85), Expect = 0.032
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = -3
Query: 673 GRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPS 494
GR S P + ++ P+ RS+ RTP+R + TP+R R++ + P R + + S
Sbjct: 619 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARRRSRTRS 677
Query: 493 TGHTQSTSRSTCLCTLRSPYRTQLR 419
+S SRS + RS RT R
Sbjct: 678 PVRRRSRSRSPARRSGRSRSRTPAR 702
Score = 34.7 bits (76), Expect = 0.39
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Frame = -3
Query: 697 RREARPIPGRKT-SALPPL-KYTLXAQCPSMSR-SQFRTP------SRYQCPPLTPSRST 545
R A P+ R++ S PP+ + ++ P+ R S+ RTP SR + PP+T RS
Sbjct: 1960 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 2019
Query: 544 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 2020 SRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 2058
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -3
Query: 694 REARPIPGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 515
R P R S P + ++ P+ RS+ R+P R + +P+R + R++ + P R
Sbjct: 643 RSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPAR 702
Query: 514 SQLTSPSTGHTQSTSRS 464
+ T + SRS
Sbjct: 703 RGRSRSRTPARRGRSRS 719
Score = 30.3 bits (65), Expect = 8.5
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Frame = -3
Query: 697 RREARPIPGRKT-SALPPLKYTLXAQCPSMSR--SQFRTP------SRYQCPPLTPSRST 545
R P+ R++ S P + ++ P ++R S+ RTP SR + P+T RS
Sbjct: 1972 RSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSR 2031
Query: 544 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 2032 SRTSPVTRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 2070
>X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting
protein protein.
Length = 494
Score = 37.5 bits (83), Expect = 0.056
Identities = 34/108 (31%), Positives = 43/108 (39%)
Frame = -3
Query: 787 PXPPXPXGXIPVKVHGTXPTPCIFPNQXXPRREARPIPGRKTSALPPLKYTLXAQCPSMS 608
P PP P + K P P N+ REA P P + + PP+ T P
Sbjct: 251 PLPPTPSRALDDK---PPPPPPPVGNRPSIHREAVPPPPPQNNK-PPVPSTPRPSAPHRP 306
Query: 607 RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
+ PSR PPL PS S + + P R+ S ST S RS
Sbjct: 307 HLRPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
>AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protein
protein.
Length = 503
Score = 37.5 bits (83), Expect = 0.056
Identities = 34/108 (31%), Positives = 43/108 (39%)
Frame = -3
Query: 787 PXPPXPXGXIPVKVHGTXPTPCIFPNQXXPRREARPIPGRKTSALPPLKYTLXAQCPSMS 608
P PP P + K P P N+ REA P P + + PP+ T P
Sbjct: 251 PLPPTPSRALDDK---PPPPPPPVGNRPSIHREAVPPPPPQNNK-PPVPSTPRPSAPHRP 306
Query: 607 RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
+ PSR PPL PS S + + P R+ S ST S RS
Sbjct: 307 HLRPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 37.1 bits (82), Expect = 0.074
Identities = 32/123 (26%), Positives = 45/123 (36%)
Frame = -3
Query: 787 PXPPXPXGXIPVKVHGTXPTPCIFPNQXXPRREARPIPGRKTSALPPLKYTLXAQCPSMS 608
P PP P +P+++ P P P+ P +P +T LP + T+ P
Sbjct: 968 PPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLPPPQTRTLPAAR-TMRQPPP--- 1023
Query: 607 RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
+ P R + PP PSR R P + PS + S C LR R
Sbjct: 1024 -PRLALPRRRRSPPRPPSRPARRGPRPTPQARRRPRPSPRRLLRSPHSLCSPRLRPGPRA 1082
Query: 427 QLR 419
R
Sbjct: 1083 DPR 1085
>BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein
protein.
Length = 510
Score = 36.3 bits (80), Expect = 0.13
Identities = 34/108 (31%), Positives = 43/108 (39%)
Frame = -3
Query: 787 PXPPXPXGXIPVKVHGTXPTPCIFPNQXXPRREARPIPGRKTSALPPLKYTLXAQCPSMS 608
P PP P + K P P N+ REA P P + + PP+ T S +
Sbjct: 251 PLPPTPSRALDDK---PPPPPPPVGNRPSIHREAVPPPPPQNNK-PPVPSTPRPSASSQA 306
Query: 607 RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
PSR PPL PS S + + P R+ S ST S RS
Sbjct: 307 PPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
>BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein.
Length = 403
Score = 36.3 bits (80), Expect = 0.13
Identities = 34/108 (31%), Positives = 43/108 (39%)
Frame = -3
Query: 787 PXPPXPXGXIPVKVHGTXPTPCIFPNQXXPRREARPIPGRKTSALPPLKYTLXAQCPSMS 608
P PP P + K P P N+ REA P P + + PP+ T S +
Sbjct: 251 PLPPTPSRALDDK---PPPPPPPVGNRPSIHREAVPPPPPQNNK-PPVPSTPRPSASSQA 306
Query: 607 RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
PSR PPL PS S + + P R+ S ST S RS
Sbjct: 307 PPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
>AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrome
protein interacting protein protein.
Length = 312
Score = 36.3 bits (80), Expect = 0.13
Identities = 34/108 (31%), Positives = 43/108 (39%)
Frame = -3
Query: 787 PXPPXPXGXIPVKVHGTXPTPCIFPNQXXPRREARPIPGRKTSALPPLKYTLXAQCPSMS 608
P PP P + K P P N+ REA P P + + PP+ T S +
Sbjct: 60 PLPPTPSRALDDK---PPPPPPPVGNRPSIHREAVPPPPPQNNK-PPVPSTPRPSASSQA 115
Query: 607 RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
PSR PPL PS S + + P R+ S ST S RS
Sbjct: 116 PPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 163
>AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 36.3 bits (80), Expect = 0.13
Identities = 34/108 (31%), Positives = 43/108 (39%)
Frame = -3
Query: 787 PXPPXPXGXIPVKVHGTXPTPCIFPNQXXPRREARPIPGRKTSALPPLKYTLXAQCPSMS 608
P PP P + K P P N+ REA P P + + PP+ T S +
Sbjct: 251 PLPPTPSRALDDK---PPPPPPPVGNRPSIHREAVPPPPPQNNK-PPVPSTPRPSASSQA 306
Query: 607 RSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
PSR PPL PS S + + P R+ S ST S RS
Sbjct: 307 PPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 34.7 bits (76), Expect = 0.39
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Frame = -3
Query: 697 RREARPIPGRKT-SALPPL-KYTLXAQCPSMSR-SQFRTP------SRYQCPPLTPSRST 545
R A P+ R++ S PP+ + ++ P+ R S+ RTP SR + PP+T RS
Sbjct: 944 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 1003
Query: 544 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 1004 SRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 1042
Score = 30.3 bits (65), Expect = 8.5
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Frame = -3
Query: 697 RREARPIPGRKT-SALPPLKYTLXAQCPSMSR--SQFRTP------SRYQCPPLTPSRST 545
R P+ R++ S P + ++ P ++R S+ RTP SR + P+T RS
Sbjct: 956 RSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSR 1015
Query: 544 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 1016 SRTSPVTRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 1054
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 34.7 bits (76), Expect = 0.39
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Frame = -3
Query: 697 RREARPIPGRKT-SALPPL-KYTLXAQCPSMSR-SQFRTP------SRYQCPPLTPSRST 545
R A P+ R++ S PP+ + ++ P+ R S+ RTP SR + PP+T RS
Sbjct: 435 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 494
Query: 544 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 495 SRTSPITRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 533
Score = 30.3 bits (65), Expect = 8.5
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Frame = -3
Query: 697 RREARPIPGRKT-SALPPLKYTLXAQCPSMSR--SQFRTP------SRYQCPPLTPSRST 545
R P+ R++ S P + ++ P ++R S+ RTP SR + P+T RS
Sbjct: 447 RSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSR 506
Query: 544 SRTQ--*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRT 428
SRT +R RS+ TSP T +S SR++ + RS RT
Sbjct: 507 SRTSPVTRRRSRSR-TSPVT-RRRSRSRTSPVTRRRSRSRT 545
>AK096477-1|BAC04801.1| 810|Homo sapiens protein ( Homo sapiens
cDNA FLJ39158 fis, clone OCBBF2002086, highly similar to
Transcriptional regulator, SIN3A. ).
Length = 810
Score = 33.9 bits (74), Expect = 0.69
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = -3
Query: 754 VKVHGTXPTPCIFPNQXX-PRREARPIPGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRY 578
+ HGT P P P P ++ P P + PP K + +Q Q TP+
Sbjct: 211 IPTHGTQPQPQPPPQHPSQPSAQSAPAPAQPAPQPPPAKVSKPSQL------QAHTPASQ 264
Query: 577 QCPPLTPSRS 548
Q PPL P S
Sbjct: 265 QTPPLPPYAS 274
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 33.5 bits (73), Expect = 0.91
Identities = 25/72 (34%), Positives = 33/72 (45%)
Frame = -3
Query: 676 PGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSP 497
P + AL P L + P S T S Y C PL S +T T P LTSP
Sbjct: 10 PAPRPPALRPCPPPLRGR-PGSSTELAPTISHYDCSPLD-STATPSTPGTAPPPKVLTSP 67
Query: 496 STGHTQSTSRST 461
+T T ++S++T
Sbjct: 68 ATTPTATSSKAT 79
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 33.5 bits (73), Expect = 0.91
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = -3
Query: 787 PXPPXPXGXIPVKVHGTXPTPCIFPNQXXPRREARPIPGRKTSALPPLKYTLXAQCPSMS 608
P PP P + ++ P P Q P+++ +P P + L P++++ Q P
Sbjct: 957 PLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPP--RPVHLQPMQFSTHIQQPPPP 1014
Query: 607 RSQF--RTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSP-STGH 485
+ Q P Q PP P++ Q R + P STGH
Sbjct: 1015 QGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGH 1058
>AK124971-1|BAC86011.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ42981 fis, clone BRTHA2007422. ).
Length = 172
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 606 EASSVPRQGTSARPLPRREAHPVPSRKGRAVPS*HP 499
EA R G + P PR+ HP+P + +P+ HP
Sbjct: 20 EAPGATRVGPPSTPAPRKVRHPLPPSQAGILPALHP 55
>AY044430-1|AAK95854.1| 621|Homo sapiens transcriptional
co-repressor Sin3A protein.
Length = 621
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = -3
Query: 754 VKVHGTXPTPCIFPNQXX-PRREARPIPGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRY 578
+ HG P P P P ++ P P + PP K + +Q Q TP+
Sbjct: 212 IPTHGIQPQPQPPPQHPSQPSAQSAPAPAQPAPQPPPAKVSKPSQL------QAHTPASQ 265
Query: 577 QCPPLTPSRS 548
Q PPL P S
Sbjct: 266 QTPPLPPYAS 275
>AK127755-1|BAC87115.1| 271|Homo sapiens protein ( Homo sapiens
cDNA FLJ45856 fis, clone OCBBF2025631. ).
Length = 271
Score = 31.5 bits (68), Expect = 3.7
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 685 RPIPGRKTSALPPLKYTLXAQCPSMSRS 602
RP PG T ALPP ++T CP+++ S
Sbjct: 191 RPCPGAFTLALPPHRHTALQLCPNVTSS 218
>AK027559-1|BAB55197.1| 1026|Homo sapiens protein ( Homo sapiens
cDNA FLJ14653 fis, clone NT2RP2002252, highly similar to
Mus musculus (clone pVZmSin3A9) mSin3A9 mRNA. ).
Length = 1026
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = -3
Query: 754 VKVHGTXPTPCIFPNQXX-PRREARPIPGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRY 578
+ HG P P P P ++ P P + PP K + +Q Q TP+
Sbjct: 211 IPTHGIQPQPQPPPQHPSQPSAQSAPAPAQPAPQPPPAKVSKPSQL------QAHTPASQ 264
Query: 577 QCPPLTPSRS 548
Q PPL P S
Sbjct: 265 QTPPLPPYAS 274
>AF418569-1|AAP97288.1| 1273|Homo sapiens MSIN3A protein.
Length = 1273
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = -3
Query: 754 VKVHGTXPTPCIFPNQXX-PRREARPIPGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRY 578
+ HG P P P P ++ P P + PP K + +Q Q TP+
Sbjct: 211 IPTHGIQPQPQPPPQHPSQPSAQSAPAPAQPAPQPPPAKVSKPSQL------QAHTPASQ 264
Query: 577 QCPPLTPSRS 548
Q PPL P S
Sbjct: 265 QTPPLPPYAS 274
>AK223352-1|BAD97072.1| 507|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 507
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 466 FSMWTGYGLSTGMLTGNGTAFSTGYG 543
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK222752-1|BAD96472.1| 508|Homo sapiens nucleoporin 54kDa variant
protein.
Length = 508
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 466 FSMWTGYGLSTGMLTGNGTAFSTGYG 543
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AK001517-1|BAA91735.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ10655 fis, clone NT2RP2005933, weakly similar to
NUCLEOPORIN NUP57. ).
Length = 484
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 466 FSMWTGYGLSTGMLTGNGTAFSTGYG 543
F TG+G +TG TG GT TG G
Sbjct: 61 FGFGTGFGTTTGTSTGLGTGLGTGLG 86
>AF157322-1|AAF67488.1| 505|Homo sapiens nucleoporin p54 protein
protein.
Length = 505
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 466 FSMWTGYGLSTGMLTGNGTAFSTGYG 543
F TG+G +TG TG GT TG G
Sbjct: 60 FGFGTGFGTTTGTSTGLGTGLGTGLG 85
>AC005005-2|AAD15618.1| 1056|Homo sapiens WUGSC:H_DJ412A9.2 protein.
Length = 1056
Score = 31.1 bits (67), Expect = 4.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 728 PVHIPKPVXTPSRSPSHTR*KNQC 657
P +PKP +PSRSPSH+ ++ C
Sbjct: 350 PPPLPKPPRSPSRSPSHSPNRSPC 373
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 907 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 938
>Y09445-1|CAA70592.1| 513|Homo sapiens TBX5 protein.
Length = 513
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGY 540
+S CT T WTGY ST LT +S G+
Sbjct: 404 YSSCTVTTVQPWTGYPTSTSPLTSPRGPWSLGW 436
>X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 556 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>CR541721-1|CAG46522.1| 522|Homo sapiens NUP62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 556 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>BC101107-1|AAI01108.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101106-1|AAI01107.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101105-1|AAI01106.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC101104-1|AAI01105.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC095410-1|AAH95410.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC050717-1|AAH50717.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 594 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 600 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 639
>BC014842-1|AAH14842.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC003663-1|AAH03663.1| 522|Homo sapiens nucleoporin 62kDa protein.
Length = 522
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 442 FSMCTGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
FS+ T T + TG+ T L GT FS G G
Sbjct: 60 FSLATQTPATQTTGFTFGTATLASGGTGFSLGIG 93
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 556 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 556 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 594 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 600 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 639
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 594 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 609 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 648
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 594 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 600 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 639
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 594 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 609 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 648
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 556 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 444 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 489
>AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 283 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 314
>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 903 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 934
>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 905 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 936
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 594 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 598 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 637
>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
protein.
Length = 1113
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 641 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 672
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 594 VPRQGTSARPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ R+ + + P RR A P P K RA PS P+R+ SP
Sbjct: 598 IQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSP 637
>AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein.
Length = 699
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 633 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 664
>AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein
protein.
Length = 757
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 536 PVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEK 441
PV VP PV +PV P P+ + +P IE+
Sbjct: 285 PVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEE 316
>AE006465-7|AAK61261.1| 199|Homo sapiens unknown protein.
Length = 199
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -3
Query: 676 PGRKTSALPPLKYTLXAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSP 497
P + L P+ TL + R RTP R P + P S +++ K+PC S++ S
Sbjct: 9 PCHAAAGLTPVPSTLGGK--EGGREPTRTPERQGQPVVPPGVSRLQSEWKQPCPSRIPSR 66
Query: 496 STG 488
G
Sbjct: 67 PLG 69
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 556 SRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
SRS S+++ P S+ S S T+S S+S RSP R++ R
Sbjct: 369 SRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSR 414
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,358,990
Number of Sequences: 237096
Number of extensions: 1457108
Number of successful extensions: 5545
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 4384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5379
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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