Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_L02
         (796 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   7.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   10.0 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   10.0 

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 95  QIVESHIPRAPP 60
           Q+  SHIP APP
Sbjct: 97  QVQGSHIPTAPP 108


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 145 TLTPGVRSPSGVKTRSE*GGSRGQHYNQTR 234
           TL PG+R+PS   T     G+   HY   R
Sbjct: 110 TLYPGMRAPSFRCTERPEDGALILHYYSDR 139


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 145 TLTPGVRSPSGVKTRSE*GGSRGQHYNQTR 234
           TL PG+R+PS   T     G+   HY   R
Sbjct: 110 TLYPGMRAPSFRCTERPEDGALILHYYSDR 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,960
Number of Sequences: 438
Number of extensions: 5008
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)