Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_K24
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.4  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    23   3.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.5  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 330 EENRRDPWLRKYYE 289
           + NRR+PW  +Y+E
Sbjct: 273 DTNRRNPWFSEYWE 286


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 330 EENRRDPWLRKYYE 289
           + NRR+PW  +Y+E
Sbjct: 363 DTNRRNPWFSEYWE 376


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 330 EENRRDPWLRKYYE 289
           E NRR+PW  +++E
Sbjct: 418 ENNRRNPWFVEFWE 431


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -1

Query: 398 SIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRI-IKNKV--SERKPEPPP 231
           S E+ + R+ +  + EP+++  +    +   Y N    N+++  KN +   E+ P P P
Sbjct: 63  SKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNYNKKLYYKNYIINIEQIPVPVP 121


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 410  SSPPSIEQPKPRQRQHSNSEPE 345
            S  P  +QP+P+Q+Q    + +
Sbjct: 1521 SQQPQQQQPQPQQQQQQQQQQQ 1542


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,015
Number of Sequences: 438
Number of extensions: 2780
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)