Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_K22
         (821 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   3.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   7.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 193 RCLVGRVHGRHVTGSADDQLR*IPPVLWY 279
           +C+V R  G     SA+ QL   PP+L Y
Sbjct: 398 QCIVRRSEGDTAQASAELQLGNAPPMLLY 426


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 193 RCLVGRVHGRHVTGSADDQLR*IPPVLWY 279
           +C+V R  G     SA+ QL   PP+L Y
Sbjct: 398 QCIVRRSEGDTAQASAELQLGNAPPMLLY 426


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -2

Query: 205 RPNSVLHNSMDPQ 167
           RP+++L+N+ DPQ
Sbjct: 89  RPDTILYNNADPQ 101


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 282 CQSIFKHVRISYSLNEVIGRTPFPRSIMFRCDHARH 389
           C S+   + I  +LN    R PF   + FRC +  H
Sbjct: 418 CNSLLNPI-IYATLNRDF-RKPFREILYFRCSNLNH 451


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,107
Number of Sequences: 438
Number of extensions: 4186
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)